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  5. Solyc06g083630.4.1

Solyc06g083630.4.1 (Solyc06g083630)


Aliases : Solyc06g083630

Description : no hits & (original description: none)


Gene families : OG0003304 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003304_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g083630.4.1

Target Alias Description ECC score Gene Family Method Actions
AT1G30890 No alias Integral membrane HRF1 family protein 0.02 OrthoFinder output from all 47 species
Azfi_s1862.g107544 No alias not classified & original description: CDS=1-825 0.03 OrthoFinder output from all 47 species
Ceric.18G071700.1 Ceric.18G071700 not classified & original description: pacid=50622187... 0.03 OrthoFinder output from all 47 species
Cre17.g704550 No alias No description available 0.02 OrthoFinder output from all 47 species
Dcu_g15274 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02278 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g00917 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g05921 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005789 endoplasmic reticulum membrane IEA Interproscan
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004559 alpha-mannosidase activity IEP HCCA
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP HCCA
MF GO:0005092 GDP-dissociation inhibitor activity IEP HCCA
CC GO:0005741 mitochondrial outer membrane IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006487 protein N-linked glycosylation IEP HCCA
BP GO:0007264 small GTPase mediated signal transduction IEP HCCA
MF GO:0015923 mannosidase activity IEP HCCA
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0018279 protein N-linked glycosylation via asparagine IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0043461 proton-transporting ATP synthase complex assembly IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0070071 proton-transporting two-sector ATPase complex assembly IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
CC GO:0072546 EMC complex IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
InterPro domains Description Start Stop
IPR005578 Yif1_fam 65 284
No external refs found!