Solyc06g083550.1.1 (Solyc06g083550)


Aliases : Solyc06g083550

Description : component FBX of SCF E3 ubiquitin ligase complex


Gene families : OG0001617 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001617_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g083550.1.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g077651 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g03115 No alias substrate adaptor of SCF E3 ubiquitin ligase complex &... 0.04 OrthoFinder output from all 47 species
Als_g00675 No alias substrate adaptor of SCF E3 ubiquitin ligase complex &... 0.02 OrthoFinder output from all 47 species
Als_g00814 No alias substrate adaptor of SCF E3 ubiquitin ligase complex &... 0.03 OrthoFinder output from all 47 species
Ceric.30G072800.1 Ceric.30G072800 not classified & original description: pacid=50609456... 0.04 OrthoFinder output from all 47 species
Dac_g29107 No alias substrate adaptor of SCF E3 ubiquitin ligase complex &... 0.03 OrthoFinder output from all 47 species
Gb_04488 No alias proteolytic chalcone synthase regulator (KFB-CHS).... 0.04 OrthoFinder output from all 47 species
Len_g23168 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g38144 No alias substrate adaptor of SCF E3 ubiquitin ligase complex &... 0.02 OrthoFinder output from all 47 species
Pnu_g24086 No alias substrate adaptor of SCF E3 ubiquitin ligase complex &... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0043.g012894 No alias not classified & original description: CDS=1-1188 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016872 intramolecular lyase activity IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 20 65
No external refs found!