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  5. Solyc06g083300.4.1

Solyc06g083300.4.1 (Solyc06g083300)


Aliases : Solyc06g083300

Description : mRNA endoribonuclease (G3BP)


Gene families : OG0000432 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000432_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g083300.4.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g010072 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g082579 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g02233 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g06595 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g16820 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g21637 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g37554 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g13702 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g11149 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.05G103300.1 Ceric.05G103300 mRNA endoribonuclease *(G3BP) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.39G021400.1 Ceric.39G021400 mRNA endoribonuclease *(G3BP) & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g04673 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g10558 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g00780 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g10216 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01027918001 No alias No description available 0.04 OrthoFinder output from all 47 species
Gb_11766 No alias mRNA endoribonuclease (G3BP) 0.03 OrthoFinder output from all 47 species
Gb_32671 No alias mRNA endoribonuclease (G3BP) 0.03 OrthoFinder output from all 47 species
LOC_Os04g43150.2 LOC_Os04g43150 mRNA endoribonuclease (G3BP) 0.03 OrthoFinder output from all 47 species
Len_g21624 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g27114 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.03 OrthoFinder output from all 47 species
MA_10429469g0010 No alias mRNA endoribonuclease (G3BP) 0.03 OrthoFinder output from all 47 species
Mp4g17080.1 No alias mRNA endoribonuclease (G3BP) 0.06 OrthoFinder output from all 47 species
Nbi_g15275 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g11984 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c26_10520V3.1 Pp3c26_10520 Nuclear transport factor 2 (NTF2) family protein with... 0.05 OrthoFinder output from all 47 species
Ppi_g13577 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g08781 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc09g090940.3.1 Solyc09g090940 mRNA endoribonuclease (G3BP) 0.03 OrthoFinder output from all 47 species
Spa_g06094 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g23025 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g05993 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e008436_P002 Zm00001e008436 mRNA endoribonuclease (G3BP) 0.04 OrthoFinder output from all 47 species
Zm00001e038048_P001 Zm00001e038048 mRNA endoribonuclease (G3BP) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 301 359
IPR002075 NTF2_dom 20 136
No external refs found!