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  5. Solyc06g082940.3.1

Solyc06g082940.3.1 (PSAL, Solyc06g082940)


Aliases : PSAL, Solyc06g082940

Description : component PsaL of PS-I complex


Gene families : OG0004406 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004406_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g082940.3.1
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00087p00141000 PSAL,... Photosynthesis.photophosphorylation.photosystem I.PS-I... 0.18 OrthoFinder output from all 47 species
AT4G12800 PSAL photosystem I subunit l 0.31 OrthoFinder output from all 47 species
Adi_g013256 PSAL component *(PsaL) of PS-I complex & original description: none 0.18 OrthoFinder output from all 47 species
Aev_g09157 PSAL component *(PsaL) of PS-I complex & original description: none 0.17 OrthoFinder output from all 47 species
Ala_g08993 PSAL component *(PsaL) of PS-I complex & original description: none 0.16 OrthoFinder output from all 47 species
Aob_g04820 PSAL component *(PsaL) of PS-I complex & original description: none 0.13 OrthoFinder output from all 47 species
Aob_g09355 PSAL component *(PsaL) of PS-I complex & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g35763 PSAL component *(PsaL) of PS-I complex & original description: none 0.08 OrthoFinder output from all 47 species
Aop_g10154 PSAL component *(PsaL) of PS-I complex & original description: none 0.17 OrthoFinder output from all 47 species
Aop_g25727 PSAL component *(PsaL) of PS-I complex & original description: none 0.17 OrthoFinder output from all 47 species
Aspi01Gene39559.t1 PSAL, Aspi01Gene39559 component *(PsaL) of PS-I complex & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene51529.t1 PSAL, Aspi01Gene51529 component *(PsaL) of PS-I complex & original description: none 0.1 OrthoFinder output from all 47 species
Azfi_s0308.g064026 PSAL component *(PsaL) of PS-I complex & original... 0.06 OrthoFinder output from all 47 species
Ceric.15G019500.1 PSAL, Ceric.15G019500 component *(PsaL) of PS-I complex & original... 0.25 OrthoFinder output from all 47 species
Ceric.39G011800.1 PSAL, Ceric.39G011800 component *(PsaL) of PS-I complex & original... 0.28 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000842.3 PSAL Photosynthesis.photophosphorylation.photosystem I.PS-I... 0.03 OrthoFinder output from all 47 species
Cre12.g486300 PSAL Photosynthesis.photophosphorylation.photosystem I.PS-I... 0.19 OrthoFinder output from all 47 species
Dac_g15189 PSAL component *(PsaL) of PS-I complex & original description: none 0.17 OrthoFinder output from all 47 species
Dcu_g05166 PSAL component *(PsaL) of PS-I complex & original description: none 0.12 OrthoFinder output from all 47 species
Dcu_g50217 PSAL component *(PsaL) of PS-I complex & original description: none 0.26 OrthoFinder output from all 47 species
Dde_g10811 PSAL component *(PsaL) of PS-I complex & original description: none 0.12 OrthoFinder output from all 47 species
Ehy_g05353 PSAL component *(PsaL) of PS-I complex & original description: none 0.1 OrthoFinder output from all 47 species
GSVIVT01019114001 PSAL Photosynthesis.photophosphorylation.photosystem I.PS-I... 0.11 OrthoFinder output from all 47 species
Gb_19355 PSAL component PsaL of PS-I complex 0.15 OrthoFinder output from all 47 species
LOC_Os12g23200.1 PSAL, LOC_Os12g23200 component PsaL of PS-I complex 0.17 OrthoFinder output from all 47 species
Len_g15230 PSAL component *(PsaL) of PS-I complex & original description: none 0.13 OrthoFinder output from all 47 species
Len_g38680 PSAL component *(PsaL) of PS-I complex & original description: none 0.14 OrthoFinder output from all 47 species
MA_3403026g0010 PSAL Photosystem I reaction center subunit XI, chloroplastic... 0.12 OrthoFinder output from all 47 species
Mp7g18150.1 PSAL component PsaL of PS-I complex 0.27 OrthoFinder output from all 47 species
Msp_g46776 PSAL component *(PsaL) of PS-I complex & original description: none 0.11 OrthoFinder output from all 47 species
Nbi_g28300 PSAL component *(PsaL) of PS-I complex & original description: none 0.12 OrthoFinder output from all 47 species
Ore_g20498 PSAL component *(PsaL) of PS-I complex & original description: none 0.13 OrthoFinder output from all 47 species
Pir_g07913 PSAL component *(PsaL) of PS-I complex & original description: none 0.08 OrthoFinder output from all 47 species
Pnu_g32516 PSAL component *(PsaL) of PS-I complex & original description: none 0.09 OrthoFinder output from all 47 species
Pp3c16_5670V3.1 PSAL, Pp3c16_5670 photosystem I subunit l 0.12 OrthoFinder output from all 47 species
Pp3c5_4200V3.1 PSAL, Pp3c5_4200 photosystem I subunit l 0.07 OrthoFinder output from all 47 species
Ppi_g26931 PSAL component *(PsaL) of PS-I complex & original description: none 0.14 OrthoFinder output from all 47 species
Sacu_v1.1_s0093.g019115 PSAL not classified & original description: CDS=148-636 0.08 OrthoFinder output from all 47 species
Sam_g39796 No alias not classified & original description: none 0.14 OrthoFinder output from all 47 species
Spa_g14824 PSAL component *(PsaL) of PS-I complex & original description: none 0.15 OrthoFinder output from all 47 species
Spa_g17661 PSAL component *(PsaL) of PS-I complex & original description: none 0.19 OrthoFinder output from all 47 species
Tin_g16739 PSAL component *(PsaL) of PS-I complex & original description: none 0.16 OrthoFinder output from all 47 species
Zm00001e016776_P001 PSAL, Zm00001e016776 component PsaL of PS-I complex 0.23 OrthoFinder output from all 47 species
Zm00001e025870_P002 PSAL, Zm00001e025870 component PsaL of PS-I complex 0.22 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0009522 photosystem I IEA Interproscan
CC GO:0009538 photosystem I reaction center IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0010109 regulation of photosynthesis IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
MF GO:0010242 oxygen evolving activity IEP HCCA
MF GO:0016854 racemase and epimerase activity IEP HCCA
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0042548 regulation of photosynthesis, light reaction IEP HCCA
BP GO:0042549 photosystem II stabilization IEP HCCA
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR003757 PSI_PsaL 63 214
No external refs found!