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  5. Solyc06g082520.3.1

Solyc06g082520.3.1 (HSI2, VAL1, Solyc06g082520)


Aliases : HSI2, VAL1, Solyc06g082520

Description : transcription factor (LAV-VAL)


Gene families : OG0001383 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001383_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g082520.3.1

Target Alias Description ECC score Gene Family Method Actions
Aev_g27437 HSL1, VAL2, HSI2-L1 LAV-VAL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g06748 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g30085 HSI2, VAL1 LAV-VAL-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g16113 HSL1, VAL2, HSI2-L1 LAV-VAL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MA_10432909g0020 HSL1, VAL2, HSI2-L1 transcription factor (LAV-VAL) 0.04 OrthoFinder output from all 47 species
MA_95218g0010 HSL1, VAL2, HSI2-L1 B3 domain-containing protein Os07g0679700 OS=Oryza... 0.03 OrthoFinder output from all 47 species
Zm00001e010557_P001 HSI2, VAL1,... transcription factor (LAV-VAL) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006486 protein glycosylation IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
InterPro domains Description Start Stop
IPR003340 B3_DNA-bd 317 416
IPR011124 Znf_CW 546 588
No external refs found!