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  5. Solyc06g076980.4.1

Solyc06g076980.4.1 (Solyc06g076980)


Aliases : Solyc06g076980

Description : no hits & (original description: none)


Gene families : OG0000607 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000607_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g076980.4.1
Cluster HCCA: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00246540 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
Azfi_s0113.g045897 No alias not classified & original description: CDS=310-1881 0.03 OrthoFinder output from all 47 species
Ehy_g10905 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01026872001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01026878001 No alias No description available 0.03 OrthoFinder output from all 47 species
Ore_g28357 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g32534 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g33218 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc03g025780.3.1 Solyc03g025780 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Spa_g53455 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g45021 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e023105_P001 Zm00001e023105 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003779 actin binding IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006598 CAP10 100 462
No external refs found!