1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc06g075567.1.1

Solyc06g075567.1.1 (WOX3, PRS1, PRS,...)


Aliases : WOX3, PRS1, PRS, Solyc06g075567

Description : transcription factor (WOX)


Gene families : OG0001319 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001319_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g075567.1.1
Cluster HCCA: Cluster_60

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00051p00020930 WOX4,... RNA biosynthesis.transcriptional activation.HB... 0.04 OrthoFinder output from all 47 species
AMTR_s00405p00009920 WUS, PGA6, WUS1,... RNA biosynthesis.transcriptional activation.HB... 0.04 OrthoFinder output from all 47 species
AT2G01500 PFS2, HOS9, WOX6 Homeodomain-like superfamily protein 0.05 OrthoFinder output from all 47 species
AT2G17950 WUS, PGA6, WUS1 Homeodomain-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT2G28610 WOX3, PRS1, PRS Homeodomain-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G18010 WOX1 WUSCHEL related homeobox 1 0.05 OrthoFinder output from all 47 species
Adi_g053615 STIP, HB-3, WOX9 WOX-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g35686 STIP, HB-3, WOX9 WOX-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.32G042200.1 STPL, WOX8,... WOX-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.32G042300.1 STPL, WOX8,... WOX-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.32G042400.1 STPL, WOX8,... WOX-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Dcu_g50892 STIP, HB-3, WOX9 WOX-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g29650 STPL, WOX8 WOX-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01008424001 WOX1 RNA biosynthesis.transcriptional activation.HB... 0.04 OrthoFinder output from all 47 species
GSVIVT01009453001 WOX4 RNA biosynthesis.transcriptional activation.HB... 0.04 OrthoFinder output from all 47 species
GSVIVT01011738001 WOX1 RNA biosynthesis.transcriptional activation.HB... 0.02 OrthoFinder output from all 47 species
GSVIVT01016360001 WOX5 RNA biosynthesis.transcriptional activation.HB... 0.05 OrthoFinder output from all 47 species
GSVIVT01021144001 STIP, HB-3, WOX9 RNA biosynthesis.transcriptional activation.HB... 0.03 OrthoFinder output from all 47 species
GSVIVT01025075001 WOX3, PRS1, PRS RNA biosynthesis.transcriptional activation.HB... 0.07 OrthoFinder output from all 47 species
Gb_01484 WOX3, PRS1, PRS transcription factor (WOX) 0.05 OrthoFinder output from all 47 species
Gb_05339 WOX4 transcription factor (WOX) 0.03 OrthoFinder output from all 47 species
Gb_12294 No alias transcription factor (WOX) 0.02 OrthoFinder output from all 47 species
Gb_12565 WOX4 transcription factor (WOX) 0.05 OrthoFinder output from all 47 species
Gb_27283 WOX3, PRS1, PRS transcription factor (WOX) 0.04 OrthoFinder output from all 47 species
Gb_29958 WOX1 transcription factor (WOX) 0.03 OrthoFinder output from all 47 species
LOC_Os01g62310.1 WOX2, LOC_Os01g62310 transcription factor (WOX) 0.02 OrthoFinder output from all 47 species
LOC_Os05g02730.1 WOX3, PRS1, PRS,... transcription factor (WOX) 0.04 OrthoFinder output from all 47 species
LOC_Os05g48990.1 STIP, HB-3,... transcription factor (WOX) 0.05 OrthoFinder output from all 47 species
LOC_Os08g14400.1 WOX12, LOC_Os08g14400 transcription factor (WOX) 0.06 OrthoFinder output from all 47 species
MA_10234279g0010 STPL, WOX8 transcription factor (WOX) 0.02 OrthoFinder output from all 47 species
MA_1910g0010 STIP, HB-3, WOX9 transcription factor (WOX) 0.02 OrthoFinder output from all 47 species
MA_42637g0010 WOX2 transcription factor (WOX) 0.02 OrthoFinder output from all 47 species
MA_8832398g0010 WOX2 transcription factor (WOX) 0.03 OrthoFinder output from all 47 species
MA_921642g0010 WOX1 transcription factor (WOX) 0.02 OrthoFinder output from all 47 species
Msp_g38403 STPL, WOX8 WOX-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g083950.3.1 WUS, PGA6, WUS1,... transcription factor (WOX) 0.04 OrthoFinder output from all 47 species
Zm00001e006644_P002 WUS, PGA6, WUS1,... transcription factor (WOX) 0.04 OrthoFinder output from all 47 species
Zm00001e009121_P001 WOX3, PRS1, PRS,... transcription factor (WOX) 0.04 OrthoFinder output from all 47 species
Zm00001e024169_P001 WOX3, PRS1, PRS,... transcription factor (WOX) 0.04 OrthoFinder output from all 47 species
Zm00001e024170_P001 Zm00001e024170 WUSCHEL-related homeobox 3B OS=Zea mays... 0.04 OrthoFinder output from all 47 species
Zm00001e029534_P001 WOX3, PRS1, PRS,... transcription factor (WOX) 0.06 OrthoFinder output from all 47 species
Zm00001e032433_P003 STIP, HB-3,... transcription factor (WOX) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0015035 protein-disulfide reductase activity IEP HCCA
MF GO:0015036 disulfide oxidoreductase activity IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
InterPro domains Description Start Stop
IPR001356 Homeobox_dom 3 63
No external refs found!