- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : Solyc06g073660
Description : xylogen-type arabinogalactan protein
Gene families : OG0000195 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000195_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00002p00240480 | evm_27.TU.AmTr_v1... | Cell wall.cell wall proteins.hydroxyproline-rich... | 0.06 | OrthoFinder output from all 47 species | |
| AMTR_s00008p00146780 | evm_27.TU.AmTr_v1... | Protein YLS3 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00013p00038620 | LTPG1,... | Cell wall.cutin and suberin.export.LTPG cuticular lipid... | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00119p00120480 | evm_27.TU.AmTr_v1... | Cell wall.cell wall proteins.hydroxyproline-rich... | 0.03 | OrthoFinder output from all 47 species | |
| AT3G43720 | No alias | Bifunctional inhibitor/lipid-transfer protein/seed... | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g04739 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g06034 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g15133 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0803.g087563 | No alias | arabinogalactan protein *(Xylogen) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.01G102400.1 | Ceric.01G102400 | not classified & original description: pacid=50593041... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.12G092700.1 | Ceric.12G092700 | not classified & original description: pacid=50601364... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g15255 | No alias | arabinogalactan protein *(Xylogen) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g02508 | No alias | arabinogalactan protein *(Xylogen) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g39546 | LTPG1 | arabinogalactan protein *(Xylogen) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g22872 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g59870.1 | LOC_Os01g59870 | xylogen-type arabinogalactan protein | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os06g49770.1 | LOC_Os06g49770 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os07g07860.1 | LOC_Os07g07860 | xylogen-type arabinogalactan protein | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os07g07930.1 | LOC_Os07g07930 | xylogen-type arabinogalactan protein | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os10g11370.1 | LOC_Os10g11370 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| Len_g14614 | No alias | arabinogalactan protein *(Xylogen) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g59470 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g12260 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g25018 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Mp8g18180.1 | No alias | xylogen-type arabinogalactan protein | 0.06 | OrthoFinder output from all 47 species | |
| Nbi_g04557 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g09535 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g27615 | No alias | arabinogalactan protein *(Xylogen) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g04354 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g24669 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g31007 | No alias | arabinogalactan protein *(Xylogen) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g44457 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g61681 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0056.g014600 | No alias | not classified & original description: CDS=65-802 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0056.g014611 | No alias | arabinogalactan protein *(Xylogen) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g02332 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Solyc08g007460.3.1 | Solyc08g007460 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc08g079250.4.1 | Solyc08g079250 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g05603 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e005960_P003 | EDA4, Zm00001e005960 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e005961_P001 | Zm00001e005961 | xylogen-type arabinogalactan protein | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e022825_P001 | Zm00001e022825 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0006066 | alcohol metabolic process | IEP | HCCA |
| BP | GO:0006793 | phosphorus metabolic process | IEP | HCCA |
| BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | HCCA |
| BP | GO:0016311 | dephosphorylation | IEP | HCCA |
| MF | GO:0016409 | palmitoyltransferase activity | IEP | HCCA |
| BP | GO:0019751 | polyol metabolic process | IEP | HCCA |
| BP | GO:0043647 | inositol phosphate metabolic process | IEP | HCCA |
| BP | GO:0044282 | small molecule catabolic process | IEP | HCCA |
| BP | GO:0046164 | alcohol catabolic process | IEP | HCCA |
| BP | GO:0046174 | polyol catabolic process | IEP | HCCA |
| BP | GO:0046434 | organophosphate catabolic process | IEP | HCCA |
| BP | GO:0046838 | phosphorylated carbohydrate dephosphorylation | IEP | HCCA |
| BP | GO:0046855 | inositol phosphate dephosphorylation | IEP | HCCA |
| BP | GO:0071545 | inositol phosphate catabolic process | IEP | HCCA |
| BP | GO:1901615 | organic hydroxy compound metabolic process | IEP | HCCA |
| BP | GO:1901616 | organic hydroxy compound catabolic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR016140 | Bifunc_inhib/LTP/seed_store | 33 | 126 |
| No external refs found! |