Solyc06g073320.3.1 (VTC2, Solyc06g073320)


Aliases : VTC2, Solyc06g073320

Description : GDP-L-galactose phosphorylase (VTC2/5)


Gene families : OG0002288 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002288_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g073320.3.1

Target Alias Description ECC score Gene Family Method Actions
AT4G26850 VTC2 mannose-1-phosphate guanylyltransferase... 0.09 OrthoFinder output from all 47 species
Aop_g15541 VTC2 GDP-L-galactose phosphorylase *(VTC2/5) & original... 0.04 OrthoFinder output from all 47 species
Azfi_s0154.g053545 VTC2 GDP-L-galactose phosphorylase *(VTC2/5) & original... 0.03 OrthoFinder output from all 47 species
Cba_g15854 VTC2 GDP-L-galactose phosphorylase *(VTC2/5) & original... 0.02 OrthoFinder output from all 47 species
Dac_g07594 VTC2 GDP-L-galactose phosphorylase *(VTC2/5) & original... 0.03 OrthoFinder output from all 47 species
LOC_Os12g08810.1 VTC5, LOC_Os12g08810 GDP-L-galactose phosphorylase (VTC2/5) 0.05 OrthoFinder output from all 47 species
Lfl_g04764 VTC2 GDP-L-galactose phosphorylase *(VTC2/5) & original... 0.02 OrthoFinder output from all 47 species
MA_162630g0010 VTC2 GDP-L-galactose phosphorylase (VTC2/5) 0.04 OrthoFinder output from all 47 species
Mp1g07760.1 VTC2 GDP-L-galactose phosphorylase (VTC2/5) 0.08 OrthoFinder output from all 47 species
Msp_g15139 VTC2 GDP-L-galactose phosphorylase *(VTC2/5) & original... 0.05 OrthoFinder output from all 47 species
Nbi_g24483 VTC2 GDP-L-galactose phosphorylase *(VTC2/5) & original... 0.02 OrthoFinder output from all 47 species
Pir_g16667 VTC2 GDP-L-galactose phosphorylase *(VTC2/5) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0138.g022513 VTC2 GDP-L-galactose phosphorylase *(VTC2/5) & original... 0.03 OrthoFinder output from all 47 species
Smo99090 VTC2 Redox homeostasis.low-molecular-weight... 0.05 OrthoFinder output from all 47 species
Zm00001e029452_P001 VTC5, Zm00001e029452 GDP-L-galactose phosphorylase (VTC2/5) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA

No InterPro domains available for this sequence

No external refs found!