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  5. Solyc06g072720.3.1

Solyc06g072720.3.1 (Solyc06g072720)


Aliases : Solyc06g072720

Description : C3H zinc finger transcription factor


Gene families : OG0000614 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000614_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g072720.3.1
Cluster HCCA: Cluster_130

Target Alias Description ECC score Gene Family Method Actions
AT1G32360 No alias Zinc finger (CCCH-type) family protein 0.02 OrthoFinder output from all 47 species
Adi_g101999 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g01971 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07773 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g20849 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g04586 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g17032 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.19G050600.1 Ceric.19G050600 not classified & original description: pacid=50576234... 0.04 OrthoFinder output from all 47 species
Ceric.38G012000.1 Ceric.38G012000 not classified & original description: pacid=50579791... 0.03 OrthoFinder output from all 47 species
Cre11.g476200 No alias No description available 0.02 OrthoFinder output from all 47 species
Len_g04738 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g57365 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g16999 No alias regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Msp_g06927 No alias A1-class (Pepsin) protease & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g12682 No alias regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Ore_g23447 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g32193 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g08578 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g09759 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0011.g005344 No alias regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0199.g025558 No alias regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0240.g026606 No alias regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Sam_g22216 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g26314 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g28481 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g28482 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g26608 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g55076 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g09583 No alias regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Tin_g15337 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 103 127
IPR000571 Znf_CCCH 236 261
IPR041367 Znf-CCCH_4 180 202
No external refs found!