Aliases : LCB2, Solyc06g072320
Description : catalytic subunit 2 of serine C-palmitoyltransferase complex
Gene families : OG0003878 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003878_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Solyc06g072320.4.1 | |
Cluster | HCCA: Cluster_73 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT3G48780 | SPT1, ATSPT1 | serine palmitoyltransferase 1 | 0.02 | OrthoFinder output from all 47 species | |
AT5G23670 | LCB2 | long chain base2 | 0.06 | OrthoFinder output from all 47 species | |
Azfi_s0032.g024795 | LCB2 | EC_2.3 acyltransferase & original description: CDS=1-1695 | 0.04 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00000025.27 | LCB2 | Lipid metabolism.sphingolipid metabolism.serine... | 0.03 | OrthoFinder output from all 47 species | |
Cre04.g230144 | LCB2 | Lipid metabolism.sphingolipid metabolism.serine... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01008621001 | LCB2 | Lipid metabolism.sphingolipid metabolism.serine... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01033008001 | LCB2 | Lipid metabolism.sphingolipid metabolism.serine... | 0.03 | OrthoFinder output from all 47 species | |
Gb_24136 | LCB2 | catalytic subunit 2 of serine C-palmitoyltransferase complex | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os01g70380.1 | LCB2, LOC_Os01g70380 | catalytic subunit 2 of serine C-palmitoyltransferase complex | 0.03 | OrthoFinder output from all 47 species | |
Pir_g11255 | LCB2 | EC_2.3 acyltransferase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Pnu_g01279 | LCB2 | EC_2.3 acyltransferase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Solyc03g098220.4.1 | SPT1, ATSPT1,... | catalytic subunit 2 of serine C-palmitoyltransferase complex | 0.04 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0009058 | biosynthetic process | IEA | Interproscan |
MF | GO:0030170 | pyridoxal phosphate binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | HCCA |
MF | GO:0003774 | cytoskeletal motor activity | IEP | HCCA |
MF | GO:0003777 | microtubule motor activity | IEP | HCCA |
MF | GO:0005515 | protein binding | IEP | HCCA |
MF | GO:0005516 | calmodulin binding | IEP | HCCA |
MF | GO:0005524 | ATP binding | IEP | HCCA |
MF | GO:0005543 | phospholipid binding | IEP | HCCA |
BP | GO:0007017 | microtubule-based process | IEP | HCCA |
BP | GO:0007018 | microtubule-based movement | IEP | HCCA |
MF | GO:0008017 | microtubule binding | IEP | HCCA |
MF | GO:0008092 | cytoskeletal protein binding | IEP | HCCA |
MF | GO:0008289 | lipid binding | IEP | HCCA |
MF | GO:0015299 | obsolete solute:proton antiporter activity | IEP | HCCA |
MF | GO:0015631 | tubulin binding | IEP | HCCA |
MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
MF | GO:0140657 | ATP-dependent activity | IEP | HCCA |
MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR004839 | Aminotransferase_I/II | 102 | 460 |
No external refs found! |