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  5. Solyc06g072040.1.1

Solyc06g072040.1.1 (HAP5A, NF-YC1,...)


Aliases : HAP5A, NF-YC1, ATHAP5A, Solyc06g072040

Description : component NF-YC of NF-Y transcription factor complex


Gene families : OG0001038 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001038_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g072040.1.1
Cluster HCCA: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00270830 NF-YC3,... RNA biosynthesis.transcriptional activation.NF-Y... 0.02 OrthoFinder output from all 47 species
Adi_g008560 NF-YC2, ATHAP5B, HAP5B component *(NF-YC) of NF-Y transcription factor complex... 0.04 OrthoFinder output from all 47 species
Adi_g060663 NF-YC2, ATHAP5B, HAP5B component *(NF-YC) of NF-Y transcription factor complex... 0.03 OrthoFinder output from all 47 species
Aev_g06001 HAP5A, NF-YC1, ATHAP5A component *(NF-YC) of NF-Y transcription factor complex... 0.03 OrthoFinder output from all 47 species
Aev_g07094 HAP5A, NF-YC1, ATHAP5A component *(NF-YC) of NF-Y transcription factor complex... 0.05 OrthoFinder output from all 47 species
Ala_g08259 NF-YC2, ATHAP5B, HAP5B component *(NF-YC) of NF-Y transcription factor complex... 0.05 OrthoFinder output from all 47 species
Als_g04782 HAP5A, NF-YC1, ATHAP5A component *(NF-YC) of NF-Y transcription factor complex... 0.03 OrthoFinder output from all 47 species
Als_g04895 HAP5A, NF-YC1, ATHAP5A component *(NF-YC) of NF-Y transcription factor complex... 0.05 OrthoFinder output from all 47 species
LOC_Os02g07450.2 NF-YC2, ATHAP5B,... component NF-YC of NF-Y transcription factor complex 0.03 OrthoFinder output from all 47 species
LOC_Os09g30310.1 NF-YC3, LOC_Os09g30310 component NF-YC of NF-Y transcription factor complex 0.04 OrthoFinder output from all 47 species
Lfl_g22035 HAP5A, NF-YC1, ATHAP5A component *(NF-YC) of NF-Y transcription factor complex... 0.03 OrthoFinder output from all 47 species
MA_33970g0010 NF-YC2, ATHAP5B, HAP5B component NF-YC of NF-Y transcription factor complex 0.03 OrthoFinder output from all 47 species
Pnu_g05864 HAP5A, NF-YC1, ATHAP5A component *(NF-YC) of NF-Y transcription factor complex... 0.05 OrthoFinder output from all 47 species
Ppi_g04989 NF-YC2, ATHAP5B, HAP5B component *(NF-YC) of NF-Y transcription factor complex... 0.02 OrthoFinder output from all 47 species
Sam_g15393 No alias component *(NF-YC) of NF-Y transcription factor complex... 0.02 OrthoFinder output from all 47 species
Tin_g11024 NF-YC2, ATHAP5B, HAP5B component *(NF-YC) of NF-Y transcription factor complex... 0.03 OrthoFinder output from all 47 species
Zm00001e024345_P001 NF-YC3, Zm00001e024345 component NF-YC of NF-Y transcription factor complex 0.08 OrthoFinder output from all 47 species
Zm00001e034481_P001 NF-YC3, Zm00001e034481 component NF-YC of NF-Y transcription factor complex 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003958 CBFA_NFYB_domain 66 129
No external refs found!