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  5. Solyc06g071160.3.1

Solyc06g071160.3.1 (Solyc06g071160)


Aliases : Solyc06g071160

Description : hydroxyproline-O-galactosyltransferase (GALT). AGP hydroxyproline O-galactosyltransferase


Gene families : OG0000727 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000727_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g071160.3.1

Target Alias Description ECC score Gene Family Method Actions
LOC_Os06g12390.2 GALT1, LOC_Os06g12390 beta-1,3-galactosyltransferase 0.01 OrthoFinder output from all 47 species
Ore_g26833 GALT1 hydroxyproline O-galactosyltransferase *(GALT) &... 0.03 OrthoFinder output from all 47 species
Pir_g18677 No alias hydroxyproline O-galactosyltransferase *(GALT) &... 0.02 OrthoFinder output from all 47 species
Pnu_g25921 No alias hydroxyproline O-galactosyltransferase *(GALT) &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006486 protein glycosylation IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0030246 carbohydrate binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR001079 Galectin_CRD 176 384
IPR002659 Glyco_trans_31 432 613
No external refs found!