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  5. Solyc06g071090.3.1

Solyc06g071090.3.1 (Solyc06g071090)


Aliases : Solyc06g071090

Description : anion transporter (NRT1/PTR)


Gene families : OG0000021 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g071090.3.1
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00020p00176510 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.MFS... 0.03 OrthoFinder output from all 47 species
AMTR_s00104p00113760 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.MFS... 0.02 OrthoFinder output from all 47 species
AMTR_s00162p00034400 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.MFS... 0.02 OrthoFinder output from all 47 species
AMTR_s00162p00034800 NRT1.1, B-1,... Solute transport.carrier-mediated transport.MFS... 0.04 OrthoFinder output from all 47 species
Aev_g09492 No alias anion transporter *(NRT1/PTR) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g26697 NRT1.5 anion transporter *(NRT1/PTR) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01009804001 PTR1, ATPTR1 Solute transport.carrier-mediated transport.MFS... 0.05 OrthoFinder output from all 47 species
GSVIVT01024796001 PTR1, ATPTR1 Solute transport.carrier-mediated transport.MFS... 0.03 OrthoFinder output from all 47 species
GSVIVT01032603001 No alias Solute transport.carrier-mediated transport.MFS... 0.03 OrthoFinder output from all 47 species
MA_19263g0020 NRT1:2, NTL1, ATNRT1:2 anion transporter (NRT1/PTR) 0.03 OrthoFinder output from all 47 species
MA_656580g0010 No alias abscisic acid transporter (AIT). anion transporter (NRT1/PTR) 0.03 OrthoFinder output from all 47 species
MA_7251355g0010 No alias anion transporter (NRT1/PTR) 0.02 OrthoFinder output from all 47 species
Ppi_g06443 No alias anion transporter *(NRT1/PTR) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g17829 ATPTR2, PTR2,... anion transporter *(NRT1/PTR) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e000322_P002 ATPTR3, PTR3,... anion transporter (NRT1/PTR) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
InterPro domains Description Start Stop
IPR000109 POT_fam 1 171
IPR000109 POT_fam 176 288
No external refs found!