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  5. Solyc06g071040.4.1

Solyc06g071040.4.1 (Solyc06g071040)


Aliases : Solyc06g071040

Description : no hits & (original description: none)


Gene families : OG0004902 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004902_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g071040.4.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g113330 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aev_g02610 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g12087 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g13951 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cre14.g629400 No alias No description available 0.02 OrthoFinder output from all 47 species
Dcu_g11941 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
GSVIVT01008051001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_23470 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os02g12360.1 LOC_Os02g12360 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g10765 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g10728 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_128292g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_128292g0020 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_26994g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Mp7g08850.1 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Pir_g59398 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0034.g011303 No alias not classified & original description: CDS=348-2951 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006354 DNA-templated transcription elongation IEP HCCA
BP GO:0006368 transcription elongation by RNA polymerase II IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
CC GO:0008023 transcription elongation factor complex IEP HCCA
BP GO:0010921 regulation of phosphatase activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016570 histone modification IEP HCCA
CC GO:0016593 Cdc73/Paf1 complex IEP HCCA
BP GO:0019220 regulation of phosphate metabolic process IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0019902 phosphatase binding IEP HCCA
MF GO:0019903 protein phosphatase binding IEP HCCA
BP GO:0031399 regulation of protein modification process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0035303 regulation of dephosphorylation IEP HCCA
BP GO:0035304 regulation of protein dephosphorylation IEP HCCA
BP GO:0043666 regulation of phosphoprotein phosphatase activity IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
BP GO:0051174 regulation of phosphorus metabolic process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051336 regulation of hydrolase activity IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!