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Aliases : Solyc06g068230
Description : Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath : 1279.0)
Gene families : OG0001797 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001797_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Solyc06g068230.4.1 | |
| Cluster | HCCA: Cluster_140 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00019p00088750 | evm_27.TU.AmTr_v1... | Protein TSS OS=Arabidopsis thaliana | 0.04 | OrthoFinder output from all 47 species | |
| AT1G01320 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.05 | OrthoFinder output from all 47 species | |
| AT1G15290 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| AT4G28080 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.05 | OrthoFinder output from all 47 species | |
| Adi_g077986 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g15019 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g21641 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g08477 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g26369 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene56297.t1 | Aspi01Gene56297 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g16051 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g37897 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.12G017100.1 | Ceric.12G017100 | not classified & original description: pacid=50600997... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.26G072500.1 | Ceric.26G072500 | not classified & original description: pacid=50600348... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g34188 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g37502 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dde_g21691 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01017381001 | No alias | Protein TSS OS=Arabidopsis thaliana | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01023693001 | No alias | Protein TSS OS=Arabidopsis thaliana | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01023694001 | No alias | Protein TSS OS=Arabidopsis thaliana | 0.05 | OrthoFinder output from all 47 species | |
| Gb_14168 | No alias | Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os04g55230.1 | LOC_Os04g55230 | Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g08747 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g03522 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_10436966g0010 | No alias | Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath : 111.0) | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g42756 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g25092 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g15877 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g07071 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g16281 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Sam_g35286 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Sam_g38446 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g44149 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Smo10032 | No alias | Protein TSS OS=Arabidopsis thaliana | 0.04 | OrthoFinder output from all 47 species | |
| Smo442478 | No alias | RNA biosynthesis.transcriptional activation.MYB... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g50937 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g55654 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g12806 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e016102_P002 | Zm00001e016102 | Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000155 | phosphorelay sensor kinase activity | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003690 | double-stranded DNA binding | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0004134 | 4-alpha-glucanotransferase activity | IEP | HCCA |
| MF | GO:0004497 | monooxygenase activity | IEP | HCCA |
| MF | GO:0004673 | protein histidine kinase activity | IEP | HCCA |
| MF | GO:0005315 | inorganic phosphate transmembrane transporter activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| BP | GO:0006817 | phosphate ion transport | IEP | HCCA |
| BP | GO:0009314 | response to radiation | IEP | HCCA |
| BP | GO:0009416 | response to light stimulus | IEP | HCCA |
| BP | GO:0009581 | detection of external stimulus | IEP | HCCA |
| BP | GO:0009582 | detection of abiotic stimulus | IEP | HCCA |
| BP | GO:0009583 | detection of light stimulus | IEP | HCCA |
| BP | GO:0009584 | detection of visible light | IEP | HCCA |
| BP | GO:0009605 | response to external stimulus | IEP | HCCA |
| BP | GO:0009628 | response to abiotic stimulus | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| MF | GO:0010277 | chlorophyllide a oxygenase [overall] activity | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| MF | GO:0015291 | secondary active transmembrane transporter activity | IEP | HCCA |
| BP | GO:0015698 | inorganic anion transport | IEP | HCCA |
| MF | GO:0016491 | oxidoreductase activity | IEP | HCCA |
| MF | GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | IEP | HCCA |
| MF | GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | IEP | HCCA |
| MF | GO:0016620 | oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | IEP | HCCA |
| MF | GO:0016701 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen | IEP | HCCA |
| MF | GO:0016703 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) | IEP | HCCA |
| MF | GO:0016775 | phosphotransferase activity, nitrogenous group as acceptor | IEP | HCCA |
| MF | GO:0016903 | oxidoreductase activity, acting on the aldehyde or oxo group of donors | IEP | HCCA |
| BP | GO:0018298 | obsolete protein-chromophore linkage | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| MF | GO:0030246 | carbohydrate binding | IEP | HCCA |
| MF | GO:0030247 | polysaccharide binding | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| MF | GO:0051536 | iron-sulfur cluster binding | IEP | HCCA |
| MF | GO:0051537 | 2 iron, 2 sulfur cluster binding | IEP | HCCA |
| MF | GO:0051540 | metal cluster binding | IEP | HCCA |
| BP | GO:0051606 | detection of stimulus | IEP | HCCA |
| BP | GO:0055114 | obsolete oxidation-reduction process | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| MF | GO:0140299 | small molecule sensor activity | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| MF | GO:2001070 | starch binding | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
| No external refs found! |