Solyc06g068140.3.1 (MBD10, Solyc06g068140)

Aliases : MBD10, Solyc06g068140

Description : methylation reader (MBD10-11)

Gene families : OG0000919 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000919_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc06g068140.3.1

Target	Alias	Description	ECC score	Gene Family Method
Cba_g16870	MBD10	methylation reader *(MBD10-11) & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01015565001	MBD10	Methyl-CpG-binding domain-containing protein 10...	0.03	OrthoFinder output from all 47 species
GSVIVT01017330001	MBD11, ATMBD11	Methyl-CpG-binding domain-containing protein 10...	0.04	OrthoFinder output from all 47 species
Solyc12g009590.2.1	MBD11, ATMBD11,...	methylation reader (MBD10-11)	0.04	OrthoFinder output from all 47 species
Spa_g33490	MBD11, ATMBD11	methylation reader *(MBD10-11) & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e012390_P001	MBD11, ATMBD11,...	methylation reader (MBD10-11)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0018995	host cellular component	None	Extended
CC	GO:0033643	host cell part	None	Extended
CC	GO:0033646	host intracellular part	None	Extended
CC	GO:0033647	host intracellular organelle	None	Extended
CC	GO:0033648	host intracellular membrane-bounded organelle	None	Extended
CC	GO:0042025	host cell nucleus	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0000123	histone acetyltransferase complex	IEP	HCCA
BP	GO:0006473	protein acetylation	IEP	HCCA
BP	GO:0006475	internal protein amino acid acetylation	IEP	HCCA
BP	GO:0016570	histone modification	IEP	HCCA
BP	GO:0016573	histone acetylation	IEP	HCCA
BP	GO:0018193	peptidyl-amino acid modification	IEP	HCCA
BP	GO:0018205	peptidyl-lysine modification	IEP	HCCA
BP	GO:0018393	internal peptidyl-lysine acetylation	IEP	HCCA
BP	GO:0018394	peptidyl-lysine acetylation	IEP	HCCA
CC	GO:0031248	protein acetyltransferase complex	IEP	HCCA
BP	GO:0043543	protein acylation	IEP	HCCA
CC	GO:0140535	intracellular protein-containing complex	IEP	HCCA
CC	GO:1902493	acetyltransferase complex	IEP	HCCA
CC	GO:1902494	catalytic complex	IEP	HCCA
CC	GO:1990234	transferase complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001739	Methyl_CpG_DNA-bd	16	81

External Links

No external refs found!