1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc06g068030.3.1

Solyc06g068030.3.1 (Solyc06g068030)


Aliases : Solyc06g068030

Description : component TRAPPC2/TRS20 of TRAPP complex


Gene families : OG0006734 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006734_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g068030.3.1
Cluster HCCA: Cluster_148

Target Alias Description ECC score Gene Family Method Actions
LOC_Os04g42500.1 LOC_Os04g42500 component TRAPPC2/TRS20 of TRAPP complex 0.04 OrthoFinder output from all 47 species
Nbi_g05069 No alias component *(TRAPPC2/TRS20) of TRAPP complex & original... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
BP GO:0022904 respiratory electron transport chain IEP HCCA
CC GO:0030008 TRAPP complex IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR006722 Sedlin 9 135
No external refs found!