Solyc06g066810.3.1 (AAA1, LUE1, FTR,...)

Aliases : AAA1, LUE1, FTR, ATKTN1, FRC2, FRA2, ERH3, KTN1, BOT1, Solyc06g066810

Description : catalytic component of Katanin ATP-dependent microtubule severing complex

Gene families : OG0004844 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004844_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc06g066810.3.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00122p00082000	AAA1, LUE1, FTR,...	Cell cycle.cytokinesis.phragmoplast disassembly.Katanin...	0.03	OrthoFinder output from all 47 species
Ala_g04907	AAA1, LUE1, FTR,...	EC_3.6 hydrolase acting on acid anhydride & original...	0.02	OrthoFinder output from all 47 species
Aob_g08392	AAA1, LUE1, FTR,...	EC_3.6 hydrolase acting on acid anhydride & original...	0.06	OrthoFinder output from all 47 species
Cba_g13901	AAA1, LUE1, FTR,...	EC_3.6 hydrolase acting on acid anhydride & original...	0.03	OrthoFinder output from all 47 species
Ceric.12G030900.1	AAA1, LUE1, FTR,...	EC_3.6 hydrolase acting on acid anhydride & original...	0.04	OrthoFinder output from all 47 species
Dac_g44887	AAA1, LUE1, FTR,...	EC_3.6 hydrolase acting on acid anhydride & original...	0.05	OrthoFinder output from all 47 species
Dcu_g09863	AAA1, LUE1, FTR,...	EC_3.6 hydrolase acting on acid anhydride & original...	0.03	OrthoFinder output from all 47 species
Ehy_g15481	AAA1, LUE1, FTR,...	EC_3.6 hydrolase acting on acid anhydride & original...	0.03	OrthoFinder output from all 47 species
Lfl_g04108	AAA1, LUE1, FTR,...	EC_3.6 hydrolase acting on acid anhydride & original...	0.03	OrthoFinder output from all 47 species
Msp_g03183	AAA1, LUE1, FTR,...	EC_3.6 hydrolase acting on acid anhydride & original...	0.02	OrthoFinder output from all 47 species
Sam_g29611	No alias	EC_3.6 hydrolase acting on acid anhydride & original...	0.06	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0006486	protein glycosylation	IEP	HCCA
BP	GO:0019538	protein metabolic process	IEP	HCCA
MF	GO:0030246	carbohydrate binding	IEP	HCCA
BP	GO:0036211	protein modification process	IEP	HCCA
BP	GO:0043412	macromolecule modification	IEP	HCCA
BP	GO:0043413	macromolecule glycosylation	IEP	HCCA
BP	GO:0070085	glycosylation	IEP	HCCA
BP	GO:1901564	organonitrogen compound metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003959	ATPase_AAA_core	270	407
IPR041569	AAA_lid_3	429	469
IPR015415	Vps4_C	470	516

External Links

No external refs found!