1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc06g066770.1.1

Solyc06g066770.1.1 (Solyc06g066770)


Aliases : Solyc06g066770

Description : proteolytic phenylalanine ammonia-lyase regulator (KFB-PAL)


Gene families : OG0000998 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000998_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g066770.1.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00142p00085040 evm_27.TU.AmTr_v1... Secondary metabolism.phenolics.regulation of key... 0.03 OrthoFinder output from all 47 species
Adi_g037960 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.19G006200.1 Ceric.19G006200 substrate(PAL) adaptor of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Ceric.19G006300.1 Ceric.19G006300 substrate(PAL) adaptor of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Ceric.19G006400.1 Ceric.19G006400 substrate(PAL) adaptor of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Ceric.19G006600.1 Ceric.19G006600 substrate(PAL) adaptor of SCF E3 ubiquitin ligase... 0.06 OrthoFinder output from all 47 species
GSVIVT01017147001 No alias Secondary metabolism.phenolics.regulation of key... 0.11 OrthoFinder output from all 47 species
GSVIVT01017151001 No alias Secondary metabolism.phenolics.regulation of key... 0.1 OrthoFinder output from all 47 species
Gb_34880 No alias proteolytic phenylalanine ammonia-lyase regulator (KFB-PAL) 0.02 OrthoFinder output from all 47 species
LOC_Os02g11790.1 LOC_Os02g11790 proteolytic phenylalanine ammonia-lyase regulator (KFB-PAL) 0.03 OrthoFinder output from all 47 species
LOC_Os11g14140.1 LOC_Os11g14140 proteolytic phenylalanine ammonia-lyase regulator (KFB-PAL) 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003410 No alias not classified & original description: CDS=1-1110 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0010215 cellulose microfibril organization IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0030198 extracellular matrix organization IEP HCCA
CC GO:0031225 obsolete anchored component of membrane IEP HCCA
BP GO:0043062 extracellular structure organization IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 9 45
IPR006652 Kelch_1 116 159
IPR006652 Kelch_1 173 208
No external refs found!