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Aliases : Solyc06g066580
Description : transcription factor (bHLH)
Gene families : OG0000725 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000725_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Solyc06g066580.4.1 | |
| Cluster | HCCA: Cluster_30 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00014p00103240 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.bHLH... | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00043p00225670 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.bHLH... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00167p00019840 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.bHLH... | 0.04 | OrthoFinder output from all 47 species | |
| AT1G27660 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.07 | OrthoFinder output from all 47 species | |
| AT1G31050 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.08 | OrthoFinder output from all 47 species | |
| AT2G20100 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.06 | OrthoFinder output from all 47 species | |
| AT3G20640 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.09 | OrthoFinder output from all 47 species | |
| AT4G21340 | B70 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| AT4G29100 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g080196 | No alias | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g06761 | No alias | bHLH-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g37882 | No alias | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g05836 | No alias | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g13143 | No alias | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g08571 | No alias | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g14362 | No alias | bHLH-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Als_g21207 | No alias | bHLH-type transcription factor & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Aop_g09878 | No alias | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g31883 | No alias | bHLH-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene54673.t1 | Aspi01Gene54673 | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g33477 | No alias | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.22G033600.1 | Ceric.22G033600 | bHLH-type transcription factor & original description:... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.32G003100.1 | Ceric.32G003100 | bHLH-type transcription factor & original description:... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.32G036000.1 | Ceric.32G036000 | bHLH-type transcription factor & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.33G028900.1 | Ceric.33G028900 | bHLH-type transcription factor & original description:... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.33G029000.1 | Ceric.33G029000 | not classified & original description: pacid=50607112... | 0.07 | OrthoFinder output from all 47 species | |
| Dac_g01494 | No alias | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g33543 | No alias | bHLH-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g37245 | No alias | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g04923 | No alias | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g23407 | No alias | bHLH-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g25638 | No alias | bHLH-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g46632 | No alias | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g18517 | No alias | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g26124 | No alias | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g29621 | No alias | bHLH-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ehy_g32053 | No alias | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01005301001 | No alias | RNA biosynthesis.transcriptional activation.bHLH... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01009761001 | No alias | RNA biosynthesis.transcriptional activation.bHLH... | 0.09 | OrthoFinder output from all 47 species | |
| GSVIVT01010280001 | No alias | RNA biosynthesis.transcriptional activation.bHLH... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01016594001 | No alias | RNA biosynthesis.transcriptional activation.bHLH... | 0.06 | OrthoFinder output from all 47 species | |
| Gb_06063 | No alias | transcription factor (bHLH) | 0.05 | OrthoFinder output from all 47 species | |
| Gb_07584 | No alias | transcription factor (bHLH) | 0.06 | OrthoFinder output from all 47 species | |
| Gb_40387 | No alias | transcription factor (bHLH) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os02g17680.1 | LOC_Os02g17680 | transcription factor (bHLH) | 0.08 | OrthoFinder output from all 47 species | |
| LOC_Os03g55220.1 | LOC_Os03g55220 | transcription factor (bHLH) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os04g41570.2 | LOC_Os04g41570 | transcription factor (bHLH) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os04g47810.1 | LOC_Os04g47810 | transcription factor (bHLH) | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os05g14010.1 | LOC_Os05g14010 | transcription factor (bHLH) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os05g42180.1 | LOC_Os05g42180 | transcription factor (bHLH) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os07g28890.1 | LOC_Os07g28890 | transcription factor (bHLH) | 0.02 | OrthoFinder output from all 47 species | |
| Len_g49434 | No alias | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g10359 | No alias | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| MA_504223g0010 | No alias | transcription factor (bHLH) | 0.03 | OrthoFinder output from all 47 species | |
| MA_94870g0010 | No alias | transcription factor (bHLH) | 0.03 | OrthoFinder output from all 47 species | |
| Mp2g19970.1 | No alias | transcription factor (bHLH) | 0.07 | OrthoFinder output from all 47 species | |
| Msp_g15621 | No alias | bHLH-type transcription factor & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Msp_g32076 | No alias | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g04901 | No alias | bHLH-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g25113 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g26048 | No alias | bHLH-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g27626 | No alias | bHLH-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Nbi_g37283 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g45184 | No alias | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g32377 | No alias | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g37653 | No alias | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g39581 | No alias | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g09411 | No alias | bHLH-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g13014 | No alias | bHLH-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0184.g024982 | No alias | bHLH-type transcription factor & original description:... | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g05050 | No alias | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g18175 | No alias | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g45099 | No alias | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Smo117274 | No alias | RNA biosynthesis.transcriptional activation.bHLH... | 0.05 | OrthoFinder output from all 47 species | |
| Smo28262 | No alias | RNA biosynthesis.transcriptional activation.bHLH... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc03g031450.3.1 | Solyc03g031450 | transcription factor (bHLH) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc04g080710.4.1 | Solyc04g080710 | transcription factor (bHLH) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc07g063830.3.1 | Solyc07g063830 | transcription factor (bHLH) | 0.07 | OrthoFinder output from all 47 species | |
| Solyc10g006640.3.1 | Solyc10g006640 | transcription factor (bHLH) | 0.06 | OrthoFinder output from all 47 species | |
| Spa_g15320 | No alias | bHLH-type transcription factor & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Tin_g44400 | No alias | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e005748_P002 | Zm00001e005748 | transcription factor (bHLH) | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e007719_P001 | Zm00001e007719 | transcription factor (bHLH) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e010350_P001 | Zm00001e010350 | transcription factor (bHLH) | 0.08 | OrthoFinder output from all 47 species | |
| Zm00001e016395_P001 | Zm00001e016395 | transcription factor (bHLH) | 0.12 | OrthoFinder output from all 47 species | |
| Zm00001e027157_P001 | Zm00001e027157 | transcription factor (bHLH) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e031298_P001 | Zm00001e031298 | transcription factor (bHLH) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e034854_P002 | Zm00001e034854 | transcription factor (bHLH) | 0.14 | OrthoFinder output from all 47 species | |
| Zm00001e041465_P001 | Zm00001e041465 | transcription factor (bHLH) | 0.06 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| MF | GO:0043531 | ADP binding | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |