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Aliases : KAN2, Solyc06g066340
Description : G2-like GARP transcription factor
Gene families : OG0000036 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Solyc06g066340.4.1 | |
| Cluster | HCCA: Cluster_444 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00022p00190540 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.MYB... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00024p00053860 | KAN, KAN1,... | RNA biosynthesis.transcriptional activation.MYB... | 0.05 | OrthoFinder output from all 47 species | |
| AMTR_s00025p00224230 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.MYB... | 0.01 | OrthoFinder output from all 47 species | |
| AMTR_s00061p00095620 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.MYB... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00119p00095480 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.MYB... | 0.03 | OrthoFinder output from all 47 species | |
| AT4G04555 | No alias | No description available | 0.02 | OrthoFinder output from all 47 species | |
| AT4G13640 | UNE16 | Homeodomain-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g006433 | PHL1 | GARP subgroup PHL transcription factor & original... | 0.01 | OrthoFinder output from all 47 species | |
| Adi_g023997 | No alias | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g052692 | No alias | transcription factor *(CLAUSA) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aev_g04653 | No alias | GARP subgroup PHL transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g36053 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Als_g07061 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Als_g10728 | KAN, KAN1 | KANADI-type transcription factor & original description: none | 0.12 | OrthoFinder output from all 47 species | |
| Als_g12175 | No alias | GARP subgroup PHL transcription factor & original... | 0.01 | OrthoFinder output from all 47 species | |
| Als_g15748 | No alias | transcription factor *(CLAUSA) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g32108 | No alias | GARP subgroup PHL transcription factor & original... | 0.01 | OrthoFinder output from all 47 species | |
| Als_g47265 | KAN, KAN1 | KANADI-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g04205 | No alias | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g04536 | No alias | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g22498 | No alias | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene24828.t1 | Aspi01Gene24828 | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene55088.t1 | Aspi01Gene55088 | GARP subgroup PHL transcription factor & original... | 0.01 | OrthoFinder output from all 47 species | |
| Azfi_s0003.g007690 | No alias | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0006.g009521 | No alias | not classified & original description: CDS=1-1092 | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g16839 | No alias | GARP subgroup PHL transcription factor & original... | 0.01 | OrthoFinder output from all 47 species | |
| Cba_g19840 | PHR1, AtPHR1 | GARP subgroup PHL transcription factor & original... | 0.01 | OrthoFinder output from all 47 species | |
| Ceric.12G033500.1 | PHL1, Ceric.12G033500 | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.22G025700.1 | Ceric.22G025700 | transcription factor *(CLAUSA) & original description:... | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g16004 | PHR1, AtPHR1 | GARP subgroup PHL transcription factor & original... | 0.05 | OrthoFinder output from all 47 species | |
| Ehy_g32284 | KAN4, ATS | KANADI-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01015900001 | APL, WDY | RNA biosynthesis.transcriptional activation.MYB... | 0.01 | OrthoFinder output from all 47 species | |
| GSVIVT01029458001 | No alias | RNA biosynthesis.transcriptional activation.MYB... | 0.02 | OrthoFinder output from all 47 species | |
| Gb_05469 | No alias | G2-like GARP transcription factor | 0.01 | OrthoFinder output from all 47 species | |
| Gb_06137 | No alias | G2-like GARP transcription factor | 0.02 | OrthoFinder output from all 47 species | |
| Gb_17437 | KAN, KAN1 | G2-like GARP transcription factor | 0.01 | OrthoFinder output from all 47 species | |
| LOC_Os02g46940.1 | KAN2, LOC_Os02g46940 | G2-like GARP transcription factor | 0.08 | OrthoFinder output from all 47 species | |
| LOC_Os08g06370.1 | KAN2, LOC_Os08g06370 | G2-like GARP transcription factor | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os08g25799.1 | LOC_Os08g25799 | G2-like GARP transcription factor | 0.1 | OrthoFinder output from all 47 species | |
| LOC_Os09g12770.1 | LOC_Os09g12770 | G2-like GARP transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os10g39550.1 | LOC_Os10g39550 | G2-like GARP transcription factor | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g01961 | PHR1, AtPHR1 | transcription factor *(PHR1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g06174 | No alias | transcription factor *(CLAUSA) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Mp4g01560.1 | No alias | G2-like GARP transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g37137 | No alias | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g38657 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g01255 | No alias | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g12418 | No alias | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g36046 | KAN4, ATS | KANADI-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g06354 | No alias | GARP subgroup PHL transcription factor & original... | 0.01 | OrthoFinder output from all 47 species | |
| Pnu_g24931 | No alias | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g28434 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g61598 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0004.g002208 | No alias | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0013.g005961 | KAN3 | not classified & original description: CDS=52-843 | 0.01 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0032.g010896 | No alias | transcription factor *(CLAUSA) & original description: CDS=80-784 | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g12596 | No alias | transcription factor *(CLAUSA) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g18448 | No alias | KANADI-type transcription factor & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Sam_g19047 | No alias | GARP subgroup PHL transcription factor & original... | 0.01 | OrthoFinder output from all 47 species | |
| Sam_g40620 | No alias | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Smo405399 | No alias | RNA biosynthesis.transcriptional activation.MYB... | 0.01 | OrthoFinder output from all 47 species | |
| Tin_g03896 | No alias | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e023282_P002 | KAN2, Zm00001e023282 | G2-like GARP transcription factor | 0.07 | OrthoFinder output from all 47 species | |
| Zm00001e035893_P001 | Zm00001e035893 | G2-like GARP transcription factor | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001005 | SANT/Myb | 213 | 264 |
| No external refs found! |