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  5. Solyc06g065330.4.1

Solyc06g065330.4.1 (Solyc06g065330)


Aliases : Solyc06g065330

Description : vacuolar sorting receptor (RMR)


Gene families : OG0000625 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000625_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g065330.4.1

Target Alias Description ECC score Gene Family Method Actions
AT5G66160 RMR1, ATRMR1 receptor homology region transmembrane domain ring H2... 0.03 OrthoFinder output from all 47 species
Adi_g014935 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.12G082300.1 Ceric.12G082300 storage vacuole protein sorting receptor *(RMR) &... 0.05 OrthoFinder output from all 47 species
Dcu_g01620 No alias storage vacuole protein sorting receptor *(RMR) &... 0.03 OrthoFinder output from all 47 species
Ehy_g04700 No alias storage vacuole protein sorting receptor *(RMR) &... 0.03 OrthoFinder output from all 47 species
Ehy_g06728 No alias storage vacuole protein sorting receptor *(RMR) &... 0.02 OrthoFinder output from all 47 species
Smo67002 No alias Vesicle trafficking.endomembrane trafficking.vacuolar... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 232 275
IPR003137 PA_domain 82 142
No external refs found!