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  5. Solyc06g061270.2.1

Solyc06g061270.2.1 (Solyc06g061270)


Aliases : Solyc06g061270

Description : solute transporter (AAAP)


Gene families : OG0000278 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000278_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g061270.2.1
Cluster HCCA: Cluster_118

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00061580 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.APC... 0.02 OrthoFinder output from all 47 species
AT3G09330 No alias Transmembrane amino acid transporter family protein 0.04 OrthoFinder output from all 47 species
Aop_g68476 No alias solute transporter *(AAAP) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0213.g058289 No alias not classified & original description: CDS=1-1143 0.02 OrthoFinder output from all 47 species
Ceric.04G003800.1 Ceric.04G003800 solute transporter *(AAAP) & original description:... 0.01 OrthoFinder output from all 47 species
Ceric.04G055400.1 Ceric.04G055400 not classified & original description: pacid=50630661... 0.03 OrthoFinder output from all 47 species
Ceric.31G038800.1 Ceric.31G038800 solute transporter *(AAAP) & original description:... 0.02 OrthoFinder output from all 47 species
Dde_g11697 No alias solute transporter *(AAAP) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g04820 No alias solute transporter *(AAAP) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01011400001 No alias Solute transport.carrier-mediated transport.APC... 0.04 OrthoFinder output from all 47 species
GSVIVT01019976001 No alias Solute transport.carrier-mediated transport.APC... 0.03 OrthoFinder output from all 47 species
GSVIVT01020259001 No alias Solute transport.carrier-mediated transport.APC... 0.03 OrthoFinder output from all 47 species
GSVIVT01020261001 No alias Solute transport.carrier-mediated transport.APC... 0.02 OrthoFinder output from all 47 species
GSVIVT01037496001 No alias Solute transport.carrier-mediated transport.APC... 0.02 OrthoFinder output from all 47 species
Gb_27840 No alias solute transporter (AAAP) 0.04 OrthoFinder output from all 47 species
LOC_Os01g40410.1 LOC_Os01g40410 solute transporter (AAAP) 0.04 OrthoFinder output from all 47 species
LOC_Os04g38680.1 LOC_Os04g38680 solute transporter (AAAP) 0.03 OrthoFinder output from all 47 species
Lfl_g06617 No alias solute transporter *(AAAP) & original description: none 0.03 OrthoFinder output from all 47 species
MA_60453g0010 No alias solute transporter (AAAP) 0.02 OrthoFinder output from all 47 species
Ore_g42250 No alias solute transporter *(AAAP) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g32348 No alias solute transporter *(AAAP) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g16581 No alias solute transporter *(AAAP) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0062.g015549 No alias solute transporter *(AAAP) & original description: CDS=1-1080 0.02 OrthoFinder output from all 47 species
Spa_g21494 No alias solute transporter *(AAAP) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0010215 cellulose microfibril organization IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
BP GO:0030198 extracellular matrix organization IEP HCCA
CC GO:0031225 obsolete anchored component of membrane IEP HCCA
BP GO:0032012 regulation of ARF protein signal transduction IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
BP GO:0043062 extracellular structure organization IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0046578 regulation of Ras protein signal transduction IEP HCCA
BP GO:0046903 secretion IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0140352 export from cell IEP HCCA
BP GO:1902531 regulation of intracellular signal transduction IEP HCCA
InterPro domains Description Start Stop
IPR013057 AA_transpt_TM 19 188
No external refs found!