Solyc06g061160.1.1 (Solyc06g061160)


Aliases : Solyc06g061160

Description : C2H2 zinc finger transcription factor


Gene families : OG0000096 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000096_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g061160.1.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00086480 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 OrthoFinder output from all 47 species
AMTR_s00079p00169240 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 OrthoFinder output from all 47 species
AMTR_s00124p00105750 KNU,... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 OrthoFinder output from all 47 species
AT1G66140 ZFP4 zinc finger protein 4 0.04 OrthoFinder output from all 47 species
AT1G80730 ZFP1, ATZFP1 zinc-finger protein 1 0.02 OrthoFinder output from all 47 species
AT2G42410 ZFP11, ATZFP11 zinc finger protein 11 0.03 OrthoFinder output from all 47 species
AT5G25160 ZFP3 zinc finger protein 3 0.03 OrthoFinder output from all 47 species
Adi_g055703 No alias C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ala_g18616 No alias C2H2 subclass ZFP transcription factor & original... 0.02 OrthoFinder output from all 47 species
Als_g06187 No alias C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Als_g17619 No alias C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Als_g27336 No alias C2H2 subclass ZFP transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene56786.t1 Aspi01Gene56786 C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0008.g011541 ZFP10, ATZFP10 C2H2 subclass ZFP transcription factor & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0065.g035758 ZFP1, ATZFP1 C2H2 subclass ZFP transcription factor & original... 0.02 OrthoFinder output from all 47 species
Cba_g19021 ZFP1, ATZFP1 C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.16G000500.1 RAB, RBE, Ceric.16G000500 C2H2 subclass ZFP transcription factor & original... 0.05 OrthoFinder output from all 47 species
Dde_g25370 ZFP1, ATZFP1 C2H2 subclass ZFP transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ehy_g11125 No alias C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ehy_g30781 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01013168001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.05 OrthoFinder output from all 47 species
Gb_26860 ZFP8 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
LOC_Os01g04120.1 LOC_Os01g04120 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
LOC_Os02g53530.1 ZFP8, LOC_Os02g53530 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
LOC_Os04g36650.1 ATZFP2, ZFP2,... C2H2 zinc finger transcription factor 0.05 OrthoFinder output from all 47 species
LOC_Os09g38610.1 ATZFP2, ZFP2,... C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
Msp_g21799 ZFP1, ATZFP1 C2H2 subclass ZFP transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ore_g43347 No alias C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pir_g14809 ZFP3 C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pir_g23397 ZFP1, ATZFP1 C2H2 subclass ZFP transcription factor & original... 0.05 OrthoFinder output from all 47 species
Smo110103 ZFP1, ATZFP1 RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 OrthoFinder output from all 47 species
Solyc03g117070.1.1 Solyc03g117070 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Solyc10g078990.1.1 GIS, Solyc10g078990 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e003962_P001 ATZFP2, ZFP2,... C2H2 zinc finger transcription factor 0.06 OrthoFinder output from all 47 species
Zm00001e010687_P001 ZFP7, Zm00001e010687 C2H2 zinc finger transcription factor 0.05 OrthoFinder output from all 47 species
Zm00001e017009_P001 Zm00001e017009 C2H2 zinc finger transcription factor 0.05 OrthoFinder output from all 47 species
Zm00001e025746_P001 Zm00001e025746 C2H2 zinc finger transcription factor 0.05 OrthoFinder output from all 47 species
Zm00001e034092_P001 ZFP10, ATZFP10,... no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e034219_P001 ATZFP2, ZFP2,... C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e034220_P001 ATZFP2, ZFP2,... C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e034221_P001 ATZFP2, ZFP2,... C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e034883_P001 ATZFP2, ZFP2,... C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
Zm00001e035448_P001 ZFP7, Zm00001e035448 C2H2 zinc finger transcription factor 0.05 OrthoFinder output from all 47 species
Zm00001e036220_P001 ZFP8, Zm00001e036220 C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
Zm00001e037944_P001 ATZFP2, ZFP2,... C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e040940_P001 ATZFP2, ZFP2,... C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0006835 dicarboxylic acid transport IEP HCCA
BP GO:0015711 organic anion transport IEP HCCA
BP GO:0015740 C4-dicarboxylate transport IEP HCCA
BP GO:0015743 malate transport IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
BP GO:0046942 carboxylic acid transport IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA

No InterPro domains available for this sequence

No external refs found!