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  5. Solyc06g060770.3.1

Solyc06g060770.3.1 (Solyc06g060770)


Aliases : Solyc06g060770

Description : Formyltetrahydrofolate deformylase 1, mitochondrial OS=Arabidopsis thaliana (sp|q93yq3|puru1_arath : 467.0)


Gene families : OG0006139 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006139_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g060770.3.1
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
Adi_g012111 No alias tetrahydrofolate deformylase *(PURU) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g11415 No alias tetrahydrofolate deformylase *(PURU) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g10636 No alias tetrahydrofolate deformylase *(PURU) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g25895 No alias tetrahydrofolate deformylase *(PURU) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g08671 No alias tetrahydrofolate deformylase *(PURU) & original description: none 0.11 OrthoFinder output from all 47 species
Msp_g26262 No alias tetrahydrofolate deformylase *(PURU) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g07361 No alias tetrahydrofolate deformylase *(PURU) & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g09266 No alias tetrahydrofolate deformylase *(PURU) & original description: none 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0009058 biosynthetic process IEA Interproscan
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR002376 Formyl_transf_N 127 304
No external refs found!