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  5. Solyc06g060730.3.1

Solyc06g060730.3.1 (Solyc06g060730)


Aliases : Solyc06g060730

Description : no hits & (original description: none)


Gene families : OG0002890 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002890_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g060730.3.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00106p00091710 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
Ceric.1Z092000.1 Ceric.1Z092000 not classified & original description: pacid=50628379... 0.03 OrthoFinder output from all 47 species
Ceric.27G023200.1 Ceric.27G023200 not classified & original description: pacid=50605964... 0.03 OrthoFinder output from all 47 species
Ceric.33G024700.1 Ceric.33G024700 not classified & original description: pacid=50606829... 0.03 OrthoFinder output from all 47 species
LOC_Os10g17740.1 LOC_Os10g17740 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ppi_g29532 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005669 transcription factor TFIID complex IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR022755 Znf_C2H2_jaz 611 636
No external refs found!