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Aliases : SEU, Solyc06g059760
Description : Transcriptional corepressor SEUSS OS=Arabidopsis thaliana (sp|q8w234|seuss_arath : 562.0)
Gene families : OG0000747 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000747_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00069p00119460 | SLK2,... | Probable transcriptional regulator SLK2 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| AT1G43850 | SEU | SEUSS transcriptional co-regulator | 0.05 | OrthoFinder output from all 47 species | |
| AT4G25515 | SLK3 | SEUSS-like 3 | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g016540 | SEU | adapter component *(SEU/SLK) of transcriptional... | 0.08 | OrthoFinder output from all 47 species | |
| Adi_g042650 | SEU | adapter component *(SEU/SLK) of transcriptional... | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g042651 | SEU | adapter component *(SEU/SLK) of transcriptional... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g086246 | SEU | adapter component *(SEU/SLK) of transcriptional... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g086260 | SEU | adapter component *(SEU/SLK) of transcriptional... | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g106397 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Adi_g117115 | SEU | adapter component *(SEU/SLK) of transcriptional... | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g46858 | SEU | adapter component *(SEU/SLK) of transcriptional... | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g14524 | SEU | adapter component *(SEU/SLK) of transcriptional... | 0.01 | OrthoFinder output from all 47 species | |
| Aob_g23087 | SEU | adapter component *(SEU/SLK) of transcriptional... | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g21250 | SEU | adapter component *(SEU/SLK) of transcriptional... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene69099.t1 | SEU, Aspi01Gene69099 | adapter component *(SEU/SLK) of transcriptional... | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0038.g026282 | SEU | adapter component *(SEU/SLK) of transcriptional... | 0.05 | OrthoFinder output from all 47 species | |
| Cba_g75940 | SEU | adapter component *(SEU/SLK) of transcriptional... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.01G063700.1 | SEU, Ceric.01G063700 | adapter component *(SEU/SLK) of transcriptional... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.03G041400.1 | SEU, Ceric.03G041400 | adapter component *(SEU/SLK) of transcriptional... | 0.09 | OrthoFinder output from all 47 species | |
| Dac_g22707 | SEU | adapter component *(SEU/SLK) of transcriptional... | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g08941 | SEU | adapter component *(SEU/SLK) of transcriptional... | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g00969 | SEU | adapter component *(SEU/SLK) of transcriptional... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g23719 | SEU | adapter component *(SEU/SLK) of transcriptional... | 0.08 | OrthoFinder output from all 47 species | |
| Ehy_g29191 | SEU | adapter component *(SEU/SLK) of transcriptional... | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01010013001 | SEU | Transcriptional corepressor SEUSS OS=Arabidopsis thaliana | 0.06 | OrthoFinder output from all 47 species | |
| GSVIVT01010616001 | SLK2 | Probable transcriptional regulator SLK2 OS=Arabidopsis thaliana | 0.05 | OrthoFinder output from all 47 species | |
| Gb_04218 | SEU | Transcriptional corepressor SEUSS OS=Arabidopsis... | 0.11 | OrthoFinder output from all 47 species | |
| Gb_04695 | SLK2 | Probable transcriptional regulator SLK2 OS=Arabidopsis... | 0.13 | OrthoFinder output from all 47 species | |
| Gb_27183 | SEU | Transcriptional corepressor SEUSS OS=Arabidopsis... | 0.1 | OrthoFinder output from all 47 species | |
| LOC_Os06g03600.1 | SLK2, LOC_Os06g03600 | Probable transcriptional regulator SLK2 OS=Arabidopsis... | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os11g10060.1 | SEU, LOC_Os11g10060 | Transcriptional corepressor SEUSS OS=Arabidopsis... | 0.12 | OrthoFinder output from all 47 species | |
| LOC_Os11g10070.1 | SEU, LOC_Os11g10070 | Transcriptional corepressor SEUSS OS=Arabidopsis... | 0.08 | OrthoFinder output from all 47 species | |
| Len_g41806 | SEU | adapter component *(SEU/SLK) of transcriptional... | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g05019 | SEU | adapter component *(SEU/SLK) of transcriptional... | 0.06 | OrthoFinder output from all 47 species | |
| Lfl_g06246 | SEU | adapter component *(SEU/SLK) of transcriptional... | 0.03 | OrthoFinder output from all 47 species | |
| MA_12796g0010 | SEU | Transcriptional corepressor SEUSS OS=Arabidopsis... | 0.05 | OrthoFinder output from all 47 species | |
| MA_208023g0010 | SLK2 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| MA_33392g0010 | SLK2 | Probable transcriptional regulator SLK2 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Mp8g17020.1 | SEU | Transcriptional corepressor SEUSS OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g38880 | SEU | adapter component *(SEU/SLK) of transcriptional... | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g03852 | SEU | adapter component *(SEU/SLK) of transcriptional... | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g42762 | SEU | adapter component *(SEU/SLK) of transcriptional... | 0.01 | OrthoFinder output from all 47 species | |
| Ppi_g04706 | SEU | adapter component *(SEU/SLK) of transcriptional... | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g19598 | No alias | adapter component *(SEU/SLK) of transcriptional... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g16513 | SEU | adapter component *(SEU/SLK) of transcriptional... | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g20497 | SEU | adapter component *(SEU/SLK) of transcriptional... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e011073_P001 | SEU, Zm00001e011073 | Transcriptional corepressor SEUSS OS=Arabidopsis... | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e021381_P001 | SEU, Zm00001e021381 | Transcriptional corepressor SEUSS OS=Arabidopsis... | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e029868_P001 | SLK2, Zm00001e029868 | Probable transcriptional regulator SLK2 OS=Arabidopsis... | 0.08 | OrthoFinder output from all 47 species | |
| Zm00001e039584_P001 | SEU, Zm00001e039584 | Transcriptional corepressor SEUSS OS=Arabidopsis... | 0.12 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| CC | GO:0005667 | transcription regulator complex | IEP | HCCA |
| CC | GO:0005669 | transcription factor TFIID complex | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006352 | DNA-templated transcription initiation | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | HCCA |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | HCCA |
| BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| CC | GO:0090575 | RNA polymerase II transcription regulator complex | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR029005 | LIM-bd/SEUSS | 319 | 574 |
| No external refs found! |