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Aliases : SEU, Solyc06g059750
Description : Transcriptional corepressor SEUSS OS=Arabidopsis thaliana (sp|q8w234|seuss_arath : 563.0)
Gene families : OG0000747 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000747_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00069p00119460 | SLK2,... | Probable transcriptional regulator SLK2 OS=Arabidopsis thaliana | 0.05 | OrthoFinder output from all 47 species | |
| AT1G43850 | SEU | SEUSS transcriptional co-regulator | 0.07 | OrthoFinder output from all 47 species | |
| AT4G25515 | SLK3 | SEUSS-like 3 | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g016540 | SEU | adapter component *(SEU/SLK) of transcriptional... | 0.05 | OrthoFinder output from all 47 species | |
| Adi_g042650 | SEU | adapter component *(SEU/SLK) of transcriptional... | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g042651 | SEU | adapter component *(SEU/SLK) of transcriptional... | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g086246 | SEU | adapter component *(SEU/SLK) of transcriptional... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g086260 | SEU | adapter component *(SEU/SLK) of transcriptional... | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g106397 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g117115 | SEU | adapter component *(SEU/SLK) of transcriptional... | 0.05 | OrthoFinder output from all 47 species | |
| Aev_g46858 | SEU | adapter component *(SEU/SLK) of transcriptional... | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g02698 | SEU | adapter component *(SEU/SLK) of transcriptional... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g21250 | SEU | adapter component *(SEU/SLK) of transcriptional... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.03G041400.1 | SEU, Ceric.03G041400 | adapter component *(SEU/SLK) of transcriptional... | 0.12 | OrthoFinder output from all 47 species | |
| Ceric.33G002300.1 | SEU, Ceric.33G002300 | adapter component *(SEU/SLK) of transcriptional... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g22707 | SEU | adapter component *(SEU/SLK) of transcriptional... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g23719 | SEU | adapter component *(SEU/SLK) of transcriptional... | 0.06 | OrthoFinder output from all 47 species | |
| Ehy_g29191 | SEU | adapter component *(SEU/SLK) of transcriptional... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01010013001 | SEU | Transcriptional corepressor SEUSS OS=Arabidopsis thaliana | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01010616001 | SLK2 | Probable transcriptional regulator SLK2 OS=Arabidopsis thaliana | 0.07 | OrthoFinder output from all 47 species | |
| Gb_04218 | SEU | Transcriptional corepressor SEUSS OS=Arabidopsis... | 0.12 | OrthoFinder output from all 47 species | |
| Gb_04695 | SLK2 | Probable transcriptional regulator SLK2 OS=Arabidopsis... | 0.12 | OrthoFinder output from all 47 species | |
| Gb_27183 | SEU | Transcriptional corepressor SEUSS OS=Arabidopsis... | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os11g10060.1 | SEU, LOC_Os11g10060 | Transcriptional corepressor SEUSS OS=Arabidopsis... | 0.09 | OrthoFinder output from all 47 species | |
| LOC_Os11g10070.1 | SEU, LOC_Os11g10070 | Transcriptional corepressor SEUSS OS=Arabidopsis... | 0.1 | OrthoFinder output from all 47 species | |
| Len_g41806 | SEU | adapter component *(SEU/SLK) of transcriptional... | 0.05 | OrthoFinder output from all 47 species | |
| Len_g54497 | SEU | adapter component *(SEU/SLK) of transcriptional... | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g05019 | SEU | adapter component *(SEU/SLK) of transcriptional... | 0.07 | OrthoFinder output from all 47 species | |
| Lfl_g06246 | SEU | adapter component *(SEU/SLK) of transcriptional... | 0.02 | OrthoFinder output from all 47 species | |
| MA_12796g0010 | SEU | Transcriptional corepressor SEUSS OS=Arabidopsis... | 0.08 | OrthoFinder output from all 47 species | |
| MA_208023g0010 | SLK2 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| MA_28020g0010 | SLK2 | Probable transcriptional regulator SLK2 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| MA_33392g0010 | SLK2 | Probable transcriptional regulator SLK2 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Mp8g17020.1 | SEU | Transcriptional corepressor SEUSS OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g03852 | SEU | adapter component *(SEU/SLK) of transcriptional... | 0.05 | OrthoFinder output from all 47 species | |
| Ore_g42762 | SEU | adapter component *(SEU/SLK) of transcriptional... | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g13626 | SEU | adapter component *(SEU/SLK) of transcriptional... | 0.02 | OrthoFinder output from all 47 species | |
| Pp3c16_1990V3.1 | SEU, Pp3c16_1990 | SEUSS transcriptional co-regulator | 0.02 | OrthoFinder output from all 47 species | |
| Pp3c25_7960V3.1 | SEU, Pp3c25_7960 | SEUSS transcriptional co-regulator | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g04706 | SEU | adapter component *(SEU/SLK) of transcriptional... | 0.05 | OrthoFinder output from all 47 species | |
| Sam_g19598 | No alias | adapter component *(SEU/SLK) of transcriptional... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g25017 | No alias | adapter component *(SEU/SLK) of transcriptional... | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g20497 | SEU | adapter component *(SEU/SLK) of transcriptional... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e011073_P001 | SEU, Zm00001e011073 | Transcriptional corepressor SEUSS OS=Arabidopsis... | 0.07 | OrthoFinder output from all 47 species | |
| Zm00001e021381_P001 | SEU, Zm00001e021381 | Transcriptional corepressor SEUSS OS=Arabidopsis... | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e029868_P001 | SLK2, Zm00001e029868 | Probable transcriptional regulator SLK2 OS=Arabidopsis... | 0.09 | OrthoFinder output from all 47 species | |
| Zm00001e039584_P001 | SEU, Zm00001e039584 | Transcriptional corepressor SEUSS OS=Arabidopsis... | 0.07 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| CC | GO:0005667 | transcription regulator complex | IEP | HCCA |
| CC | GO:0005669 | transcription factor TFIID complex | IEP | HCCA |
| BP | GO:0006352 | DNA-templated transcription initiation | IEP | HCCA |
| MF | GO:0008270 | zinc ion binding | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| CC | GO:0090575 | RNA polymerase II transcription regulator complex | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR029005 | LIM-bd/SEUSS | 322 | 577 |
| No external refs found! |