Solyc06g054420.3.1 (Solyc06g054420)


Aliases : Solyc06g054420

Description : no hits & (original description: none)


Gene families : OG0002419 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002419_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g054420.3.1

Target Alias Description ECC score Gene Family Method Actions
AT1G16180 No alias Serinc-domain containing serine and sphingolipid... 0.02 OrthoFinder output from all 47 species
Adi_g010693 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g10444 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.19G079300.1 Ceric.19G079300 not classified & original description: pacid=50575149... 0.03 OrthoFinder output from all 47 species
Cre09.g412803 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01017882001 No alias No description available 0.04 OrthoFinder output from all 47 species
Msp_g05319 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g10724 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g01866 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e004337_P003 Zm00001e004337 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
BP GO:0016073 snRNA metabolic process IEP HCCA
BP GO:0016180 snRNA processing IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
BP GO:0031123 RNA 3'-end processing IEP HCCA
BP GO:0034472 snRNA 3'-end processing IEP HCCA
BP GO:0034477 U6 snRNA 3'-end processing IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
InterPro domains Description Start Stop
IPR005016 TDE1/TMS 6 409
No external refs found!