Solyc06g054400.3.1 (Solyc06g054400)

Aliases : Solyc06g054400

Description : Met-tRNA positioning component eIF5B of initiator tRNA carrier complex

Gene families : OG0003112 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003112_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc06g054400.3.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s02879p00004340	evm_27.TU.AmTr_v1...	No description available	0.04	OrthoFinder output from all 47 species
AT1G21160	No alias	eukaryotic translation initiation factor 2 (eIF-2) family protein	0.04	OrthoFinder output from all 47 species
Dac_g13418	No alias	Met-tRNA positioning component *(eIF5B) of initiator...	0.02	OrthoFinder output from all 47 species
GSVIVT01034895001	No alias	Protein biosynthesis.translation initiation.eIF5B...	0.04	OrthoFinder output from all 47 species
Gb_28583	No alias	Met-tRNA positioning component eIF5B of initiator tRNA...	0.02	OrthoFinder output from all 47 species
LOC_Os05g51500.1	LOC_Os05g51500	Met-tRNA positioning component eIF5B of initiator tRNA...	0.09	OrthoFinder output from all 47 species
Ore_g33223	No alias	Met-tRNA positioning component *(eIF5B) of initiator...	0.03	OrthoFinder output from all 47 species
Zm00001e026670_P001	Zm00001e026670	Met-tRNA positioning component eIF5B of initiator tRNA...	0.08	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003682	chromatin binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000795	T_Tr_GTP-bd_dom	554	763
IPR004161	EFTu-like_2	788	866
IPR023115	TIF_IF2_dom3	889	990

External Links

No external refs found!