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  5. LOC_Os03g42900.1

LOC_Os03g42900.1


Description : Flowering locus K homology domain OS=Arabidopsis thaliana (sp|q9sr13|flk_arath : 334.0)


Gene families : OG_01_0001697 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001697_tree ,
OG_02_0001748 (LandPlants) Phylogenetic Tree(s): OG_02_0001748_tree ,
OG_03_0003559 (SeedPlants) Phylogenetic Tree(s): OG_03_0003559_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g42900.1
Cluster HCCA: Cluster_380

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00263460 evm_27.TU.AmTr_v1... Flowering locus K homology domain OS=Arabidopsis thaliana 0.02 Archaeplastida
AT4G26000 PEP RNA-binding KH domain-containing protein 0.02 Archaeplastida
GSVIVT01029319001 No alias RNA-binding KH domain-containing protein PEPPER... 0.03 Archaeplastida
Gb_12788 No alias Flowering locus K homology domain OS=Arabidopsis... 0.04 Archaeplastida
MA_10433906g0010 No alias Flowering locus K homology domain OS=Arabidopsis... 0.03 Archaeplastida
Mp7g17380.1 No alias Flowering locus K homology domain OS=Arabidopsis... 0.02 Archaeplastida
Solyc01g097010.3.1 No alias Flowering locus K homology domain OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e003145_P004 No alias Flowering locus K homology domain OS=Arabidopsis... 0.06 Archaeplastida
Zm00001e012426_P001 No alias Flowering locus K homology domain OS=Arabidopsis... 0.02 Archaeplastida
Zm00001e037859_P001 No alias RNA-binding KH domain-containing protein PEPPER... 0.04 Archaeplastida
AMTR_s00002p00263460 evm_27.TU.AmTr_v1... Flowering locus K homology domain OS=Arabidopsis thaliana 0.02 LandPlants
AT4G26000 PEP RNA-binding KH domain-containing protein 0.02 LandPlants
GSVIVT01029319001 No alias RNA-binding KH domain-containing protein PEPPER... 0.03 LandPlants
MA_10433906g0010 No alias Flowering locus K homology domain OS=Arabidopsis... 0.03 LandPlants
Solyc01g097010.3.1 No alias Flowering locus K homology domain OS=Arabidopsis... 0.02 LandPlants
Zm00001e003145_P004 No alias Flowering locus K homology domain OS=Arabidopsis... 0.06 LandPlants
Zm00001e037859_P001 No alias RNA-binding KH domain-containing protein PEPPER... 0.04 LandPlants
MA_10433906g0010 No alias Flowering locus K homology domain OS=Arabidopsis... 0.01 SeedPlants
Zm00001e003145_P004 No alias Flowering locus K homology domain OS=Arabidopsis... 0.06 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004088 KH_dom_type_1 202 267
IPR004088 KH_dom_type_1 384 446
IPR004088 KH_dom_type_1 110 161
No external refs found!