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  5. Solyc06g053510.3.1

Solyc06g053510.3.1 (SPDS1, Solyc06g053510)


Aliases : SPDS1, Solyc06g053510

Description : Putrescine N-methyltransferase 3 OS=Nicotiana tabacum (sp|q9seh5|pmt3_tobac : 515.0) & Enzyme classification.EC_2 transferases.EC_2.5 transferase transferring alkyl or aryl group, other than methyl group(50.2.5 : 434.4)


Gene families : OG0001566 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001566_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g053510.3.1
Cluster HCCA: Cluster_65

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00268590 SPDS1,... Enzyme classification.EC_2 transferases.EC_2.5... 0.09 OrthoFinder output from all 47 species
AMTR_s00159p00023000 SPDS3, ATSPDS3,... Polyamine... 0.02 OrthoFinder output from all 47 species
Ala_g09370 SPDS1 EC_2.5 transferase transferring alkyl or aryl group,... 0.04 OrthoFinder output from all 47 species
Als_g12253 SPDS1 EC_2.5 transferase transferring alkyl or aryl group,... 0.05 OrthoFinder output from all 47 species
Aob_g13550 SPDS1 EC_2.5 transferase transferring alkyl or aryl group,... 0.04 OrthoFinder output from all 47 species
Aspi01Gene14558.t1 SPDS1, Aspi01Gene14558 EC_2.5 transferase transferring alkyl or aryl group,... 0.03 OrthoFinder output from all 47 species
Cba_g05350 SPDS3, ATSPDS3, SPMS not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g06190 SPDS1 EC_2.5 transferase transferring alkyl or aryl group,... 0.02 OrthoFinder output from all 47 species
Len_g17960 SPDS1 EC_2.5 transferase transferring alkyl or aryl group,... 0.03 OrthoFinder output from all 47 species
Ore_g29768 SPDS2 EC_2.5 transferase transferring alkyl or aryl group,... 0.02 OrthoFinder output from all 47 species
Zm00001e024848_P005 SPDS3, ATSPDS3,... spermine synthase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0008131 primary amine oxidase activity IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0048038 quinone binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
InterPro domains Description Start Stop
IPR035246 Spermidine_synt_N 56 110
No external refs found!