Solyc06g052130.2.1 (Solyc06g052130)

Aliases : Solyc06g052130

Description : NSR RNA splicing regulator

Gene families : OG0000722 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000722_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc06g052130.2.1

Target	Alias	Description	ECC score	Gene Family Method
Adi_g055616	No alias	RNA splicing regulator *(NSR) & original description: none	0.03	OrthoFinder output from all 47 species
Als_g37403	No alias	RNA splicing regulator *(NSR) & original description: none	0.02	OrthoFinder output from all 47 species
Solyc06g052147.1.1	Solyc06g052147	NSR RNA splicing regulator	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0000786	nucleosome	IEP	HCCA
BP	GO:0006952	defense response	IEP	HCCA
CC	GO:0032993	protein-DNA complex	IEP	HCCA
CC	GO:0044815	DNA packaging complex	IEP	HCCA
BP	GO:0050896	response to stimulus	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000504	RRM_dom	49	113

External Links

No external refs found!