Solyc06g052115.1.1 (Solyc06g052115)

Aliases : Solyc06g052115

Description : NSR RNA splicing regulator

Gene families : OG0000722 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000722_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc06g052115.1.1

Target	Alias	Description	ECC score	Gene Family Method
Adi_g055616	No alias	RNA splicing regulator *(NSR) & original description: none	0.03	OrthoFinder output from all 47 species
Als_g37403	No alias	RNA splicing regulator *(NSR) & original description: none	0.02	OrthoFinder output from all 47 species
Solyc06g052143.1.1	Solyc06g052143	NSR RNA splicing regulator	0.05	OrthoFinder output from all 47 species
Solyc06g052147.1.1	Solyc06g052147	NSR RNA splicing regulator	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0000786	nucleosome	IEP	HCCA
BP	GO:0006952	defense response	IEP	HCCA
CC	GO:0032993	protein-DNA complex	IEP	HCCA
CC	GO:0044815	DNA packaging complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000504	RRM_dom	31	99

External Links

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