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  5. Solyc06g051920.4.1

Solyc06g051920.4.1 (ATCNGC1, CNGC1, Solyc06g051920)


Aliases : ATCNGC1, CNGC1, Solyc06g051920

Description : cyclic nucleotide-gated cation channel (CNGC)


Gene families : OG0000170 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000170_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g051920.4.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00155680 ATCNGC20,... Solute transport.channels.VIC superfamily.cyclic... 0.03 OrthoFinder output from all 47 species
AT1G19780 ATCNGC8, CNGC8 cyclic nucleotide gated channel 8 0.05 OrthoFinder output from all 47 species
AT3G48010 ATCNGC16, CNGC16 cyclic nucleotide-gated channel 16 0.06 OrthoFinder output from all 47 species
AT4G30360 ATCNGC17, CNGC17 cyclic nucleotide-gated channel 17 0.06 OrthoFinder output from all 47 species
AT5G14870 CNGC18, ATCNGC18 cyclic nucleotide-gated channel 18 0.07 OrthoFinder output from all 47 species
Adi_g123270 CNGC5, ATCNGC5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g12676 CNGC15, ATCNGC15 cyclic nucleotide-gated cation channel *(CNGC) &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene46957.t1 CNGC15,... cyclic nucleotide-gated cation channel *(CNGC) &... 0.03 OrthoFinder output from all 47 species
Azfi_s0050.g030979 DND1, ATCNGC2, CNGC2 cyclic nucleotide-gated cation channel *(CNGC) &... 0.03 OrthoFinder output from all 47 species
Ceric.23G068600.1 CNGC15,... cyclic nucleotide-gated cation channel *(CNGC) &... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001264.1 No alias No description available 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021348.58 No alias Putative cyclic nucleotide-gated ion channel 8... 0.01 OrthoFinder output from all 47 species
Dac_g20415 ATCNGC20, CNGC20, CNBT1 cyclic nucleotide-gated cation channel *(CNGC) &... 0.02 OrthoFinder output from all 47 species
Ehy_g02798 ATCNGC9, CNGC9 cyclic nucleotide-gated cation channel *(CNGC) &... 0.02 OrthoFinder output from all 47 species
GSVIVT01007785001 CNGC18, ATCNGC18 Solute transport.channels.VIC superfamily.cyclic... 0.03 OrthoFinder output from all 47 species
GSVIVT01015970001 ATCNGC8, CNGC8 Solute transport.channels.VIC superfamily.cyclic... 0.05 OrthoFinder output from all 47 species
GSVIVT01028711001 ATCNGC1, CNGC1 Solute transport.channels.VIC superfamily.cyclic... 0.03 OrthoFinder output from all 47 species
GSVIVT01029404001 ATCNGC20, CNGC20, CNBT1 Solute transport.channels.VIC superfamily.cyclic... 0.03 OrthoFinder output from all 47 species
GSVIVT01033170001 ATCNGC14, CNGC14 Solute transport.channels.VIC superfamily.cyclic... 0.03 OrthoFinder output from all 47 species
LOC_Os02g54760.1 ATCNGC17,... cyclic nucleotide-gated cation channel (CNGC) 0.03 OrthoFinder output from all 47 species
LOC_Os05g42250.1 DND2, CNGC4,... cyclic nucleotide-gated cation channel (CNGC) 0.03 OrthoFinder output from all 47 species
LOC_Os06g08850.1 ATCNGC17,... cyclic nucleotide-gated cation channel (CNGC) 0.03 OrthoFinder output from all 47 species
LOC_Os12g06570.1 CNGC18,... cyclic nucleotide-gated cation channel (CNGC) 0.04 OrthoFinder output from all 47 species
LOC_Os12g28260.1 CNGC7, ATCNGC7,... cyclic nucleotide-gated cation channel (CNGC) 0.03 OrthoFinder output from all 47 species
Lfl_g05634 ATCNGC20, CNGC20, CNBT1 cyclic nucleotide-gated cation channel *(CNGC) &... 0.03 OrthoFinder output from all 47 species
MA_10428782g0010 ATCNGC14, CNGC14 cyclic nucleotide-gated cation channel (CNGC) 0.03 OrthoFinder output from all 47 species
Msp_g06561 CNGC5, ATCNGC5 cyclic nucleotide-gated cation channel *(CNGC) &... 0.03 OrthoFinder output from all 47 species
Msp_g14154 CNGC15, ATCNGC15 cyclic nucleotide-gated cation channel *(CNGC) &... 0.02 OrthoFinder output from all 47 species
Nbi_g09414 CNGC15, ATCNGC15 cyclic nucleotide-gated cation channel *(CNGC) &... 0.03 OrthoFinder output from all 47 species
Nbi_g11227 ATCNGC20, CNGC20, CNBT1 cyclic nucleotide-gated cation channel *(CNGC) &... 0.02 OrthoFinder output from all 47 species
Ore_g09435 ATCNGC20, CNGC20, CNBT1 cyclic nucleotide-gated cation channel *(CNGC) &... 0.05 OrthoFinder output from all 47 species
Pir_g10343 ATCNGC20, CNGC20, CNBT1 cyclic nucleotide-gated cation channel *(CNGC) &... 0.03 OrthoFinder output from all 47 species
Pir_g38103 DND1, ATCNGC2, CNGC2 temperature sensor protein *(CNGC2) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g18538 ATCNGC20, CNGC20, CNBT1 cyclic nucleotide-gated cation channel *(CNGC) &... 0.03 OrthoFinder output from all 47 species
Ppi_g06447 CNGC7, ATCNGC7 cyclic nucleotide-gated cation channel *(CNGC) &... 0.02 OrthoFinder output from all 47 species
Sam_g11868 No alias cyclic nucleotide-gated cation channel *(CNGC) &... 0.04 OrthoFinder output from all 47 species
Smo113786 ATCNGC9, CNGC9 Solute transport.channels.VIC superfamily.cyclic... 0.03 OrthoFinder output from all 47 species
Solyc02g086990.4.1 CNGC18,... cyclic nucleotide-gated cation channel (CNGC) 0.04 OrthoFinder output from all 47 species
Tin_g08737 CNGC15, ATCNGC15 cyclic nucleotide-gated cation channel *(CNGC) &... 0.03 OrthoFinder output from all 47 species
Zm00001e006772_P003 CNGC5, ATCNGC5,... cyclic nucleotide-gated cation channel (CNGC) 0.02 OrthoFinder output from all 47 species
Zm00001e011591_P002 CNGC18,... cyclic nucleotide-gated cation channel (CNGC) 0.04 OrthoFinder output from all 47 species
Zm00001e024846_P003 ATCNGC1, CNGC1,... cyclic nucleotide-gated cation channel (CNGC) 0.03 OrthoFinder output from all 47 species
Zm00001e032059_P001 DND2, CNGC4,... cyclic nucleotide-gated cation channel (CNGC) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005216 monoatomic ion channel activity IEA Interproscan
BP GO:0006811 monoatomic ion transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006952 defense response IEP HCCA
InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 89 404
No external refs found!