Solyc06g050550.4.1 (SNX2a, Solyc06g050550)


Aliases : SNX2a, Solyc06g050550

Description : component SNX2 of Retromer protein recycling complex


Gene families : OG0001743 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001743_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g050550.4.1
Cluster HCCA: Cluster_105

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00023p00059770 SNX2a,... Vesicle trafficking.endomembrane trafficking.protein... 0.04 OrthoFinder output from all 47 species
Adi_g011827 SNX2b regulatory factor SNX2 of Retromer protein recycling... 0.02 OrthoFinder output from all 47 species
Adi_g011828 SNX2a regulatory factor SNX2 of Retromer protein recycling... 0.03 OrthoFinder output from all 47 species
Aop_g08868 SNX2a regulatory factor SNX2 of Retromer protein recycling... 0.02 OrthoFinder output from all 47 species
Ceric.01G006700.1 SNX2b, Ceric.01G006700 regulatory factor SNX2 of Retromer protein recycling... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0035091 phosphatidylinositol binding IEA Interproscan
Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
InterPro domains Description Start Stop
IPR001683 PX_dom 2 39
IPR015404 Vps5_C 109 341
No external refs found!