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  5. Solyc06g050110.2.1

Solyc06g050110.2.1 (ATGA20OX2, AT2353,...)


Aliases : ATGA20OX2, AT2353, GA20OX2, Solyc06g050110

Description : gibberellin 20-oxidase


Gene families : OG0003609 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003609_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g050110.2.1
Cluster HCCA: Cluster_61

Target Alias Description ECC score Gene Family Method Actions
AT1G44090 ATGA20OX5, GA20OX5 gibberellin 20-oxidase 5 0.03 OrthoFinder output from all 47 species
AT5G07200 ATGA20OX3,... gibberellin 20-oxidase 3 0.03 OrthoFinder output from all 47 species
AT5G51810 ATGA20OX2,... gibberellin 20 oxidase 2 0.03 OrthoFinder output from all 47 species
Aob_g22002 GA5, GA20OX1,... EC_1.14 oxidoreductase acting on paired donor with... 0.02 OrthoFinder output from all 47 species
Dcu_g18550 GA5, GA20OX1,... EC_1.14 oxidoreductase acting on paired donor with... 0.02 OrthoFinder output from all 47 species
GSVIVT01026466001 ATGA20OX2,... Phytohormones.gibberellin.synthesis.gibberellin 20-oxidase 0.05 OrthoFinder output from all 47 species
GSVIVT01027572001 GA5, GA20OX1,... Phytohormones.gibberellin.synthesis.gibberellin 20-oxidase 0.03 OrthoFinder output from all 47 species
Pnu_g05556 GA5, GA20OX1,... EC_1.14 oxidoreductase acting on paired donor with... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010215 cellulose microfibril organization IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0030198 extracellular matrix organization IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
CC GO:0031225 obsolete anchored component of membrane IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0043062 extracellular structure organization IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR005123 Oxoglu/Fe-dep_dioxygenase 207 305
IPR026992 DIOX_N 44 147
No external refs found!