1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc06g049070.3.1

Solyc06g049070.3.1 (Solyc06g049070)


Aliases : Solyc06g049070

Description : nucleotide sugar transporter (URGT/UXT)


Gene families : OG0002095 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002095_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g049070.3.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g055090 No alias nucleotide sugar transporter *(URGT/UXT) & original... 0.02 OrthoFinder output from all 47 species
Adi_g086110 No alias nucleotide sugar transporter *(URGT/UXT) & original... 0.02 OrthoFinder output from all 47 species
Ala_g01461 No alias nucleotide sugar transporter *(URGT/UXT) & original... 0.07 OrthoFinder output from all 47 species
Aob_g07836 No alias nucleotide sugar transporter *(URGT/UXT) & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0229.g059107 No alias nucleotide sugar transporter *(URGT/UXT) & original... 0.03 OrthoFinder output from all 47 species
Ceric.06G056800.1 Ceric.06G056800 nucleotide sugar transporter *(URGT/UXT) & original... 0.05 OrthoFinder output from all 47 species
Ceric.38G022300.1 Ceric.38G022300 nucleotide sugar transporter *(URGT/UXT) & original... 0.05 OrthoFinder output from all 47 species
Cre17.g710850 No alias UDP-xylose transporter 2 OS=Arabidopsis thaliana 0.08 OrthoFinder output from all 47 species
Dcu_g02768 No alias nucleotide sugar transporter *(URGT/UXT) & original... 0.04 OrthoFinder output from all 47 species
Ehy_g19598 No alias nucleotide sugar transporter *(URGT/UXT) & original... 0.06 OrthoFinder output from all 47 species
GSVIVT01032677001 No alias Solute transport.carrier-mediated transport.DMT... 0.03 OrthoFinder output from all 47 species
Gb_29422 No alias nucleotide sugar transporter (URGT/UXT) 0.03 OrthoFinder output from all 47 species
LOC_Os05g07670.1 LOC_Os05g07670 nucleotide sugar transporter (URGT/UXT) 0.08 OrthoFinder output from all 47 species
LOC_Os06g30950.1 LOC_Os06g30950 nucleotide sugar transporter (URGT/UXT) 0.02 OrthoFinder output from all 47 species
Lfl_g04714 No alias nucleotide sugar transporter *(URGT/UXT) & original... 0.04 OrthoFinder output from all 47 species
MA_941767g0010 No alias UDP-xylose transporter 3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp3g23580.1 No alias nucleotide sugar transporter (URGT/UXT) 0.04 OrthoFinder output from all 47 species
Ppi_g02952 No alias nucleotide sugar transporter *(URGT/UXT) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005964 No alias nucleotide sugar transporter *(URGT/UXT) & original... 0.03 OrthoFinder output from all 47 species
Sam_g16671 No alias nucleotide sugar transporter *(URGT/UXT) & original... 0.02 OrthoFinder output from all 47 species
Smo268189 No alias Solute transport.carrier-mediated transport.DMT... 0.04 OrthoFinder output from all 47 species
Solyc06g082500.3.1 Solyc06g082500 nucleotide sugar transporter (URGT/UXT) 0.04 OrthoFinder output from all 47 species
Solyc11g069540.3.1 Solyc11g069540 nucleotide sugar transporter (URGT/UXT) 0.03 OrthoFinder output from all 47 species
Zm00001e007567_P001 Zm00001e007567 nucleotide sugar transporter (URGT/UXT) 0.02 OrthoFinder output from all 47 species
Zm00001e025853_P001 Zm00001e025853 nucleotide sugar transporter (URGT/UXT) 0.05 OrthoFinder output from all 47 species
Zm00001e026728_P001 Zm00001e026728 nucleotide sugar transporter (URGT/UXT) 0.15 OrthoFinder output from all 47 species
Zm00001e031074_P001 Zm00001e031074 nucleotide sugar transporter (URGT/UXT) 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP HCCA
MF GO:0005048 signal sequence binding IEP HCCA
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006487 protein N-linked glycosylation IEP HCCA
BP GO:0006621 protein retention in ER lumen IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP HCCA
BP GO:0015780 nucleotide-sugar transmembrane transport IEP HCCA
BP GO:0015931 nucleobase-containing compound transport IEP HCCA
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
BP GO:0018279 protein N-linked glycosylation via asparagine IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030126 COPI vesicle coat IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
BP GO:0032507 maintenance of protein location in cell IEP HCCA
MF GO:0033218 amide binding IEP HCCA
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP HCCA
MF GO:0042277 peptide binding IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0045185 maintenance of protein location IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
MF GO:0046923 ER retention sequence binding IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051235 maintenance of location IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0051651 maintenance of location in cell IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0072595 maintenance of protein localization in organelle IEP HCCA
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901264 carbohydrate derivative transport IEP HCCA
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR004853 Sugar_P_trans_dom 21 294
No external refs found!