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Aliases : Solyc06g049030
Description : RING-H2 finger protein ATL72 OS=Arabidopsis thaliana (sp|q9sg96|atl72_arath : 154.0)
Gene families : OG0000008 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G22500 | No alias | RING/U-box superfamily protein | 0.06 | OrthoFinder output from all 47 species | |
| Adi_g000680 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g012395 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g015773 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g04830 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g01280 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g58281 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g22041 | ATL2, TL2 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0059.g034708 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0093.g043291 | No alias | not classified & original description: CDS=1-675 | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.25G031000.1 | ATL2, TL2,... | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.05 | OrthoFinder output from all 47 species | |
| Dac_g14726 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.05 | OrthoFinder output from all 47 species | |
| Dac_g14773 | ATL31, CNI1 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g28798 | ATL2, TL2 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g01132 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01026703001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01032684001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
| Gb_05811 | No alias | RING-H2-class E3 ligase | 0.05 | OrthoFinder output from all 47 species | |
| Gb_08038 | No alias | RING-H2-class E3 ligase | 0.05 | OrthoFinder output from all 47 species | |
| Gb_28932 | No alias | no hits & (original description: none) | 0.08 | OrthoFinder output from all 47 species | |
| Gb_39486 | No alias | RING-H2 finger protein ATL16 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g64620.1 | LOC_Os01g64620 | RING-H2 finger protein ATL72 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g57410.1 | LOC_Os03g57410 | Putative RING-H2 finger protein ATL71 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os04g49000.1 | BRH1, LOC_Os04g49000 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os04g49550.1 | RHA3A, LOC_Os04g49550 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os05g36310.1 | LOC_Os05g36310 | RING-H2 finger protein ATL77 OS=Arabidopsis thaliana... | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os06g34470.1 | RHA1B, LOC_Os06g34470 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os06g34640.1 | LOC_Os06g34640 | no hits & (original description: none) | 0.09 | OrthoFinder output from all 47 species | |
| LOC_Os06g34650.1 | LOC_Os06g34650 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os06g34880.1 | ATL43, LOC_Os06g34880 | RING-H2-class E3 ligase | 0.05 | OrthoFinder output from all 47 species | |
| Lfl_g29042 | XERICO | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g39385 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_10021g0010 | No alias | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g14483 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ore_g04496 | DEP | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g32586 | DEP | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g39132 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g02997 | BRH1 | E3 ubiquitin ligase *(BRH) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g11149 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g17683 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g12485 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Solyc05g018760.3.1 | XERICO, Solyc05g018760 | ubiquitin protein ligase (XERICO) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc08g008080.1.1 | BRH1, Solyc08g008080 | E3 ubiquitin-protein ligase RHA1B OS=Arabidopsis... | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g02204 | ATL2, TL2 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g07577 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e000396_P001 | Zm00001e000396 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e003426_P001 | XERICO, Zm00001e003426 | ubiquitin protein ligase (XERICO) | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e009142_P001 | Zm00001e009142 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e014764_P001 | Zm00001e014764 | RING-H2 finger protein ATL72 OS=Arabidopsis thaliana... | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e018028_P001 | Zm00001e018028 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e019438_P001 | Zm00001e019438 | RING-H2 finger protein ATL72 OS=Arabidopsis thaliana... | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e041385_P001 | Zm00001e041385 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e041409_P001 | BRH1, Zm00001e041409 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005875 | microtubule associated complex | IEP | HCCA |
| BP | GO:0007017 | microtubule-based process | IEP | HCCA |
| CC | GO:0030286 | dynein complex | IEP | HCCA |
| CC | GO:0032991 | protein-containing complex | IEP | HCCA |
| CC | GO:1902494 | catalytic complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001841 | Znf_RING | 108 | 151 |
| No external refs found! |