Solyc06g048520.3.1 (Solyc06g048520)


Aliases : Solyc06g048520

Description : no hits & (original description: none)


Gene families : OG0001946 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001946_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g048520.3.1

Target Alias Description ECC score Gene Family Method Actions
Als_g03747 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g01313 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene01444.t1 Aspi01Gene01444 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0006.g010456 No alias not classified & original description: CDS=427-1908 0.05 OrthoFinder output from all 47 species
Ceric.07G039400.1 Ceric.07G039400 not classified & original description: pacid=50626115... 0.06 OrthoFinder output from all 47 species
Ceric.32G005500.1 Ceric.32G005500 not classified & original description: pacid=50598076... 0.04 OrthoFinder output from all 47 species
Dac_g02234 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08137 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g17270 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g12991 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os01g07390.1 LOC_Os01g07390 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g02782 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g15861 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10425822g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g05984 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g36528 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g05845 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0092.g018883 No alias not classified & original description: CDS=196-1485 0.1 OrthoFinder output from all 47 species
Sam_g11875 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Solyc03g095450.3.1 Solyc03g095450 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0015267 channel activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 372 411
No external refs found!