Solyc06g048410.4.1 (ATFSD1, FSD1, Solyc06g048410)

Aliases : ATFSD1, FSD1, Solyc06g048410

Description : iron superoxide dismutase. PAP4/FSD3 cofactor of plastid-encoded RNA polymerase. PAP9/FSD2 cofactor of plastid-encoded RNA polymerase

Gene families : OG0002805 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002805_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc06g048410.4.1
Cluster	HCCA: Cluster_154

Target	Alias	Description	ECC score	Gene Family Method
Aspi01Gene46557.t1	ATFSD1, FSD1,...	cofactor of plastid-encoded RNA polymerase *(PAP9/FSD2)...	0.03	OrthoFinder output from all 47 species
Cre10.g436050	ATFSD1, FSD1	Redox homeostasis.enzymatic reactive oxygen species...	0.01	OrthoFinder output from all 47 species
Lfl_g07682	FSD2	cofactor of plastid-encoded RNA polymerase *(PAP9/FSD2)...	0.02	OrthoFinder output from all 47 species
MA_209007g0010	FSD3	Superoxide dismutase [Fe], chloroplastic (Fragment)...	0.02	OrthoFinder output from all 47 species
Spa_g51744	FSD2	iron superoxide dismutase *(FSD) & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004784	superoxide dismutase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006801	superoxide metabolic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016209	antioxidant activity	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016721	oxidoreductase activity, acting on superoxide radicals as acceptor	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
MF	GO:0046872	metal ion binding	IEA	Interproscan
BP	GO:0055114	obsolete oxidation-reduction process	IEA	Interproscan
BP	GO:0072593	reactive oxygen species metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004559	alpha-mannosidase activity	IEP	HCCA
BP	GO:0005996	monosaccharide metabolic process	IEP	HCCA
BP	GO:0006013	mannose metabolic process	IEP	HCCA
BP	GO:0009058	biosynthetic process	IEP	HCCA
MF	GO:0015923	mannosidase activity	IEP	HCCA
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	HCCA
MF	GO:0016779	nucleotidyltransferase activity	IEP	HCCA
BP	GO:0019318	hexose metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR019831	Mn/Fe_SOD_N	48	133
IPR019832	Mn/Fe_SOD_C	140	241

External Links

No external refs found!

Solyc06g048410.4.1 (ATFSD1, FSD1, Solyc06g048410)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation