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  5. Solyc06g034140.3.1

Solyc06g034140.3.1 (Solyc06g034140)


Aliases : Solyc06g034140

Description : transcription factor (REM)


Gene families : OG0000663 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000663_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g034140.3.1
Cluster HCCA: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00078p00115450 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.B3... 0.06 OrthoFinder output from all 47 species
AT5G58280 No alias AP2/B3-like transcriptional factor family protein 0.08 OrthoFinder output from all 47 species
Als_g15351 No alias REM-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Als_g51859 No alias REM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g06897 No alias REM-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g25439 No alias REM-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g36068 No alias REM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene61918.t1 Aspi01Gene61918 REM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.02G084400.1 Ceric.02G084400 REM-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.07G043800.1 Ceric.07G043800 REM-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g15058 No alias REM-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g43688 No alias REM-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g25035 No alias REM-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01007552001 No alias B3 domain-containing protein Os01g0905400 OS=Oryza... 0.01 OrthoFinder output from all 47 species
GSVIVT01022143001 No alias RNA biosynthesis.transcriptional activation.B3... 0.03 OrthoFinder output from all 47 species
GSVIVT01031848001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_07025 No alias transcription factor (REM) 0.03 OrthoFinder output from all 47 species
Gb_35990 No alias transcription factor (REM) 0.04 OrthoFinder output from all 47 species
LOC_Os01g67830.1 LOC_Os01g67830 B3 domain-containing protein Os01g0905400 OS=Oryza... 0.07 OrthoFinder output from all 47 species
LOC_Os03g08620.1 LOC_Os03g08620 transcription factor (REM) 0.11 OrthoFinder output from all 47 species
Len_g56640 No alias REM-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g28691 No alias REM-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
MA_10433064g0010 No alias transcription factor (REM) 0.08 OrthoFinder output from all 47 species
MA_175090g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_430451g0010 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
MA_7869355g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp2g08790.1 No alias transcription factor (REM) 0.03 OrthoFinder output from all 47 species
Msp_g36795 No alias REM-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g44971 No alias REM-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g08674 No alias REM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g34487 No alias REM-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g35599 No alias REM-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g39771 No alias REM-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g11582 No alias REM-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g14471 No alias REM-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0085.g018379 No alias REM-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Sam_g14184 No alias REM-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g48173 No alias REM-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g00422 No alias REM-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g03459 No alias REM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g00720 No alias REM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g11017 No alias REM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e000624_P003 Zm00001e000624 transcription factor (REM) 0.03 OrthoFinder output from all 47 species
Zm00001e018925_P002 Zm00001e018925 B3 domain-containing protein Os01g0905400 OS=Oryza... 0.01 OrthoFinder output from all 47 species
Zm00001e020584_P001 Zm00001e020584 transcription factor (REM) 0.07 OrthoFinder output from all 47 species
Zm00001e021364_P001 Zm00001e021364 B3 domain-containing protein Os11g0197600 OS=Oryza... 0.05 OrthoFinder output from all 47 species
Zm00001e040028_P004 Zm00001e040028 transcription factor (REM) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004144 diacylglycerol O-acyltransferase activity IEP HCCA
MF GO:0004866 endopeptidase inhibitor activity IEP HCCA
MF GO:0004867 serine-type endopeptidase inhibitor activity IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
MF GO:0016411 acylglycerol O-acyltransferase activity IEP HCCA
MF GO:0030414 peptidase inhibitor activity IEP HCCA
BP GO:0045017 glycerolipid biosynthetic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
MF GO:0061134 peptidase regulator activity IEP HCCA
MF GO:0061135 endopeptidase regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR003340 B3_DNA-bd 84 174
No external refs found!