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  5. LOC_Os03g42220.1

LOC_Os03g42220.1


Description : CCT2 subunit beta of CCT chaperonin folding complex


Gene families : OG_01_0005394 (Archaeplastida) Phylogenetic Tree(s): OG_01_0005394_tree ,
OG_02_0006074 (LandPlants) Phylogenetic Tree(s): OG_02_0006074_tree ,
OG_03_0006574 (SeedPlants) Phylogenetic Tree(s): OG_03_0006574_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g42220.1
Cluster HCCA: Cluster_176

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00149p00026500 evm_27.TU.AmTr_v1... Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.09 Archaeplastida
AT5G20890 No alias TCP-1/cpn60 chaperonin family protein 0.19 Archaeplastida
Cpa|evm.model.tig00020903.30 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.03 Archaeplastida
Cre09.g416750 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.07 Archaeplastida
GSVIVT01008708001 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.11 Archaeplastida
MA_10434959g0010 No alias CCT2 subunit beta of CCT chaperonin folding complex 0.1 Archaeplastida
Mp5g16030.1 No alias CCT2 subunit beta of CCT chaperonin folding complex 0.07 Archaeplastida
Pp3c5_16830V3.1 No alias TCP-1/cpn60 chaperonin family protein 0.03 Archaeplastida
Pp3c6_15940V3.1 No alias TCP-1/cpn60 chaperonin family protein 0.08 Archaeplastida
Smo171093 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.06 Archaeplastida
Solyc11g069000.2.1 No alias CCT2 subunit beta of CCT chaperonin folding complex 0.1 Archaeplastida
Zm00001e017228_P001 No alias CCT2 subunit beta of CCT chaperonin folding complex 0.15 Archaeplastida
Zm00001e025595_P002 No alias CCT2 subunit beta of CCT chaperonin folding complex 0.15 Archaeplastida
AMTR_s00149p00026500 evm_27.TU.AmTr_v1... Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.09 LandPlants
AT5G20890 No alias TCP-1/cpn60 chaperonin family protein 0.19 LandPlants
GSVIVT01008708001 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.1 LandPlants
MA_10434959g0010 No alias CCT2 subunit beta of CCT chaperonin folding complex 0.08 LandPlants
Mp5g16030.1 No alias CCT2 subunit beta of CCT chaperonin folding complex 0.07 LandPlants
Pp3c5_16830V3.1 No alias TCP-1/cpn60 chaperonin family protein 0.03 LandPlants
Pp3c6_15940V3.1 No alias TCP-1/cpn60 chaperonin family protein 0.08 LandPlants
Smo171093 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.06 LandPlants
Solyc11g069000.2.1 No alias CCT2 subunit beta of CCT chaperonin folding complex 0.1 LandPlants
Zm00001e017228_P001 No alias CCT2 subunit beta of CCT chaperonin folding complex 0.15 LandPlants
Zm00001e025595_P002 No alias CCT2 subunit beta of CCT chaperonin folding complex 0.15 LandPlants
AMTR_s00149p00026500 evm_27.TU.AmTr_v1... Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.09 SeedPlants
AT5G20890 No alias TCP-1/cpn60 chaperonin family protein 0.18 SeedPlants
GSVIVT01008708001 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.1 SeedPlants
MA_10434959g0010 No alias CCT2 subunit beta of CCT chaperonin folding complex 0.08 SeedPlants
Solyc11g069000.2.1 No alias CCT2 subunit beta of CCT chaperonin folding complex 0.1 SeedPlants
Zm00001e017228_P001 No alias CCT2 subunit beta of CCT chaperonin folding complex 0.15 SeedPlants
Zm00001e025595_P002 No alias CCT2 subunit beta of CCT chaperonin folding complex 0.15 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002423 Cpn60/TCP-1 28 515
No external refs found!