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  5. Solyc06g030570.3.1

Solyc06g030570.3.1 (Solyc06g030570)


Aliases : Solyc06g030570

Description : no hits & (original description: none)


Gene families : OG0001131 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001131_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g030570.3.1
Cluster HCCA: Cluster_133

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00058p00171240 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AT2G39670 No alias Radical SAM superfamily protein 0.04 OrthoFinder output from all 47 species
Adi_g114284 No alias RlmN-type rRNA methyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g19965 No alias RlmN-type rRNA methyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g23487 No alias RlmN-type rRNA methyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g12635 No alias RlmN-type rRNA methyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0665.g081748 No alias RlmN-type rRNA methyltransferase & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.08G040900.1 Ceric.08G040900 RlmN-type rRNA methyltransferase & original description:... 0.05 OrthoFinder output from all 47 species
Dcu_g01123 No alias RlmN-type rRNA methyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g04328 No alias RlmN-type rRNA methyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01016561001 No alias No description available 0.09 OrthoFinder output from all 47 species
GSVIVT01020239001 No alias No description available 0.08 OrthoFinder output from all 47 species
Gb_41070 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g45370.1 LOC_Os01g45370 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
LOC_Os01g74190.1 LOC_Os01g74190 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
Lfl_g06989 No alias RlmN-type rRNA methyltransferase & original description: none 0.07 OrthoFinder output from all 47 species
MA_10064935g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_952069g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp1g04510.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp7g12660.1 No alias no hits & (original description: none) 0.1 OrthoFinder output from all 47 species
Nbi_g03514 No alias RlmN-type rRNA methyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Smo85220 No alias No description available 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
MF GO:0051536 iron-sulfur cluster binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003747 translation release factor activity IEP HCCA
MF GO:0004177 aminopeptidase activity IEP HCCA
BP GO:0006415 translational termination IEP HCCA
MF GO:0008079 translation termination factor activity IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0022411 cellular component disassembly IEP HCCA
BP GO:0032984 protein-containing complex disassembly IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR007197 rSAM 153 314
No external refs found!