Solyc06g011275.1.1 (Solyc06g011275)


Aliases : Solyc06g011275

Description : Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum (sp|p10978|polx_tobac : 202.0)


Gene families : OG0000004 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g011275.1.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g009669 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g013962 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g014639 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g016156 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g019321 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g028966 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g048405 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g078003 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g082159 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g110837 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g121002 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g123800 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g124577 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g129866 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g130110 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g28692 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g41721 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g43647 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g48460 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g48539 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g49770 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g17960 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g51809 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g24386 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene08388.t1 Aspi01Gene08388 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene08712.t1 Aspi01Gene08712 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene10767.t1 CRK8, Aspi01Gene10767 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene11269.t1 Aspi01Gene11269 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene15266.t1 Aspi01Gene15266 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene16737.t1 Aspi01Gene16737 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene16944.t1 ORF240B, Aspi01Gene16944 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene17019.t1 Aspi01Gene17019 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene18208.t1 CRK8, Aspi01Gene18208 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene19256.t1 ORF240B, Aspi01Gene19256 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene25358.t1 Aspi01Gene25358 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene26241.t1 Aspi01Gene26241 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene27254.t1 CRK8, Aspi01Gene27254 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene31527.t1 Aspi01Gene31527 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene35226.t1 Aspi01Gene35226 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene36499.t1 EMB2769, Aspi01Gene36499 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene40360.t1 Aspi01Gene40360 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene40410.t1 Aspi01Gene40410 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene40732.t1 Aspi01Gene40732 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene42700.t1 Aspi01Gene42700 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene42777.t1 Aspi01Gene42777 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene42810.t1 Aspi01Gene42810 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene43046.t1 Aspi01Gene43046 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene52334.t1 Aspi01Gene52334 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene52643.t1 Aspi01Gene52643 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene54062.t1 Aspi01Gene54062 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene60661.t1 Aspi01Gene60661 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene65204.t1 Aspi01Gene65204 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene66643.t1 ORF240B, Aspi01Gene66643 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene72678.t1 Aspi01Gene72678 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g34187 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g37903 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.01G062400.1 Ceric.01G062400 not classified & original description: pacid=50591589... 0.02 OrthoFinder output from all 47 species
Ceric.02G096700.1 Ceric.02G096700 not classified & original description: pacid=50586098... 0.02 OrthoFinder output from all 47 species
Ceric.05G030600.1 Ceric.05G030600 not classified & original description: pacid=50578483... 0.02 OrthoFinder output from all 47 species
Ceric.06G015100.1 Ceric.06G015100 not classified & original description: pacid=50619235... 0.02 OrthoFinder output from all 47 species
Ceric.06G015400.1 Ceric.06G015400 not classified & original description: pacid=50619900... 0.02 OrthoFinder output from all 47 species
Ceric.07G054000.1 Ceric.07G054000 not classified & original description: pacid=50626247... 0.03 OrthoFinder output from all 47 species
Ceric.07G093000.1 CRK8, Ceric.07G093000 not classified & original description: pacid=50627358... 0.03 OrthoFinder output from all 47 species
Ceric.10G040100.1 Ceric.10G040100 not classified & original description: pacid=50612675... 0.02 OrthoFinder output from all 47 species
Ceric.12G092900.1 CRK8, Ceric.12G092900 not classified & original description: pacid=50601960... 0.02 OrthoFinder output from all 47 species
Ceric.19G021300.1 CRK8, Ceric.19G021300 not classified & original description: pacid=50575495... 0.02 OrthoFinder output from all 47 species
Ceric.20G026200.1 CRK8, Ceric.20G026200 not classified & original description: pacid=50567177... 0.02 OrthoFinder output from all 47 species
Ceric.35G005900.1 Ceric.35G005900 not classified & original description: pacid=50581034... 0.02 OrthoFinder output from all 47 species
Dac_g26307 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g39016 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g16069 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g25676 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01031819001 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.03 OrthoFinder output from all 47 species
Gb_15114 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.02 OrthoFinder output from all 47 species
Gb_28681 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.02 OrthoFinder output from all 47 species
Gb_29057 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.03 OrthoFinder output from all 47 species
Lfl_g07690 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g08516 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g28559 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g32969 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g35297 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g28868 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g12518 CRK8 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g16140 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g17187 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g20605 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g28323 CRK8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g29648 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g34801 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g37002 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g39660 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g40645 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g41904 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g42688 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g08665 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g61863 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g62091 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g02509 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g06103 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g19573 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g22481 ORF240B not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g24316 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g24383 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g24754 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g31404 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g33505 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c10_20080V3.1 Pp3c10_20080 No annotation 0.02 OrthoFinder output from all 47 species
Pp3c17_2840V3.1 Pp3c17_2840 No annotation 0.02 OrthoFinder output from all 47 species
Pp3c19_10910V3.1 Pp3c19_10910 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 0.01 OrthoFinder output from all 47 species
Pp3c3_32070V3.1 Pp3c3_32070 No annotation 0.01 OrthoFinder output from all 47 species
Pp3c4_5390V3.1 Pp3c4_5390 No annotation 0.01 OrthoFinder output from all 47 species
Pp3s38_160V3.1 CRK8, Pp3s38_160 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 0.01 OrthoFinder output from all 47 species
Solyc02g032035.1.1 Solyc02g032035 Retrovirus-related Pol polyprotein from transposon TNT... 0.05 OrthoFinder output from all 47 species
Solyc05g015653.1.1 ORF240B, Solyc05g015653 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc11g061755.1.1 Solyc11g061755 Retrovirus-related Pol polyprotein from transposon TNT... 0.04 OrthoFinder output from all 47 species
Solyc11g150135.1.1 Solyc11g150135 Retrovirus-related Pol polyprotein from transposon TNT... 0.04 OrthoFinder output from all 47 species
Solyc12g027655.1.1 Solyc12g027655 Retrovirus-related Pol polyprotein from transposon TNT... 0.02 OrthoFinder output from all 47 species
Spa_g20554 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g11962 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g32409 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA

No InterPro domains available for this sequence

No external refs found!