Solyc06g008780.3.1 (TIR1, Solyc06g008780)


Aliases : TIR1, Solyc06g008780

Description : component TIR1/AFB of auxin receptor complex. component FBX of SCF E3 ubiquitin ligase complex


Gene families : OG0000211 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000211_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g008780.3.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g015381 COI1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g04056 COI1 component *(COI) of jasmonic acid receptor complex &... 0.02 OrthoFinder output from all 47 species
Ehy_g03881 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.03 OrthoFinder output from all 47 species
Ehy_g06039 TIR1 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.02 OrthoFinder output from all 47 species
LOC_Os03g08850.1 AFB5, LOC_Os03g08850 component TIR1/AFB of auxin receptor complex. component... 0.02 OrthoFinder output from all 47 species
Len_g15985 COI1 component *(COI) of jasmonic acid receptor complex &... 0.04 OrthoFinder output from all 47 species
Lfl_g03214 COI1 component *(COI) of jasmonic acid receptor complex &... 0.02 OrthoFinder output from all 47 species
Lfl_g06224 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.02 OrthoFinder output from all 47 species
Msp_g07144 COI1 component *(COI) of jasmonic acid receptor complex &... 0.02 OrthoFinder output from all 47 species
Msp_g19205 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.02 OrthoFinder output from all 47 species
Ore_g26263 TIR1 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.01 OrthoFinder output from all 47 species
Ppi_g05861 COI1 component *(COI) of jasmonic acid receptor complex &... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!