Solyc06g008560.2.1 (Solyc06g008560)


Aliases : Solyc06g008560

Description : no hits & (original description: none)


Gene families : OG0000236 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000236_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g008560.2.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00100500 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00106p00150110 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00131p00055770 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT1G16750 No alias Protein of unknown function, DUF547 0.07 OrthoFinder output from all 47 species
AT1G21060 No alias Protein of unknown function, DUF547 0.05 OrthoFinder output from all 47 species
AT1G43020 No alias Protein of unknown function, DUF547 0.16 OrthoFinder output from all 47 species
AT2G39690 No alias Protein of unknown function, DUF547 0.07 OrthoFinder output from all 47 species
AT3G12540 No alias Protein of unknown function, DUF547 0.15 OrthoFinder output from all 47 species
AT3G18900 No alias unknown protein; CONTAINS InterPro DOMAIN/s: Protein of... 0.05 OrthoFinder output from all 47 species
AT4G37080 No alias Protein of unknown function, DUF547 0.05 OrthoFinder output from all 47 species
AT5G60720 No alias Protein of unknown function, DUF547 0.03 OrthoFinder output from all 47 species
Adi_g008972 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g060878 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g02356 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g19268 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g20675 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g25226 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g03826 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g10150 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g13551 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g21743 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07461 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g11890 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g19804 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene13666.t1 Aspi01Gene13666 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene62766.t1 Aspi01Gene62766 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene66708.t1 Aspi01Gene66708 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0005.g009305 No alias not classified & original description: CDS=291-2180 0.05 OrthoFinder output from all 47 species
Azfi_s0006.g009681 No alias not classified & original description: CDS=140-2005 0.03 OrthoFinder output from all 47 species
Azfi_s0064.g035514 No alias not classified & original description: CDS=742-2646 0.03 OrthoFinder output from all 47 species
Azfi_s1603.g104559 No alias not classified & original description: CDS=825-2666 0.03 OrthoFinder output from all 47 species
Cba_g03959 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g22564 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g24608 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g34443 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g39103 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.02G060000.1 Ceric.02G060000 not classified & original description: pacid=50584416... 0.04 OrthoFinder output from all 47 species
Ceric.12G063900.1 Ceric.12G063900 not classified & original description: pacid=50600480... 0.07 OrthoFinder output from all 47 species
Ceric.19G019200.1 Ceric.19G019200 not classified & original description: pacid=50576159... 0.11 OrthoFinder output from all 47 species
Ceric.25G053000.1 Ceric.25G053000 not classified & original description: pacid=50593159... 0.04 OrthoFinder output from all 47 species
Dac_g12477 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g13842 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g14778 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g23842 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08174 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g37118 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g38895 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g50801 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g23028 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g51927 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02735 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g04973 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01001956001 No alias No description available 0.05 OrthoFinder output from all 47 species
GSVIVT01014994001 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01025228001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01029449001 No alias No description available 0.05 OrthoFinder output from all 47 species
Gb_10011 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Gb_16429 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_17913 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os01g05480.3 LOC_Os01g05480 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os03g64230.1 LOC_Os03g64230 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os07g03140.1 LOC_Os07g03140 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os08g40420.1 LOC_Os08g40420 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
LOC_Os09g28850.1 LOC_Os09g28850 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os10g41040.1 LOC_Os10g41040 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Len_g07477 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g59225 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g27106 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp1g27890.1 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Msp_g14595 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g21647 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g31356 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g03702 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g07704 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g09584 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g22667 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g14919 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g09452 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g03170 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g05228 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g22714 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000442 No alias not classified & original description: CDS=698-2671 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001935 No alias not classified & original description: CDS=1-2133 0.09 OrthoFinder output from all 47 species
Sam_g09691 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g25536 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g30130 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g35283 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo407459 No alias No description available 0.02 OrthoFinder output from all 47 species
Solyc01g109270.3.1 Solyc01g109270 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc02g065480.2.1 Solyc02g065480 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Solyc08g078520.4.1 Solyc08g078520 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Solyc11g069840.3.1 Solyc11g069840 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Spa_g10732 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g13793 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g14701 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g17295 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g26671 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g49986 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g51544 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g08972 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13862 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g28902 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g29415 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e002322_P002 Zm00001e002322 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e009970_P005 Zm00001e009970 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e011613_P001 Zm00001e011613 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e021904_P001 Zm00001e021904 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
Zm00001e034560_P003 Zm00001e034560 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
InterPro domains Description Start Stop
IPR025757 MIP1_Leuzipper 14 95
IPR006869 DUF547 337 441
No external refs found!