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  5. Solyc06g008500.3.1

Solyc06g008500.3.1 (XBAT35, Solyc06g008500)


Aliases : XBAT35, Solyc06g008500

Description : RING-HC-class E3 ligase


Gene families : OG0001126 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001126_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g008500.3.1

Target Alias Description ECC score Gene Family Method Actions
Ala_g13982 XBAT35 E3 ubiquitin ligase *(XBAT3) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01020545001 XBAT35 Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
Msp_g37472 XBAT35 E3 ubiquitin ligase *(XBAT3) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004470 malic enzyme activity IEP HCCA
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
MF GO:0008252 nucleotidase activity IEP HCCA
MF GO:0008253 5'-nucleotidase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016615 malate dehydrogenase activity IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
MF GO:0051287 NAD binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!