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  5. Solyc06g008200.3.1

Solyc06g008200.3.1 (PHL1, Solyc06g008200)


Aliases : PHL1, Solyc06g008200

Description : PHR1 transcription factor involved in proline synthesis regulation. G2-like GARP transcription factor. transcription factor (PHR1)


Gene families : OG0000036 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g008200.3.1
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00142p00049490 evm_27.TU.AmTr_v1... Nutrient uptake.phosphorus assimilation.phosphate... 0.02 OrthoFinder output from all 47 species
AT5G29000 PHL1 Homeodomain-like superfamily protein 0.04 OrthoFinder output from all 47 species
Aev_g09816 PHL1 GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Als_g09189 No alias transcription factor *(CLAUSA) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g42445 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Als_g62358 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aob_g04205 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0005.g009458 No alias not classified & original description: CDS=1-426 0.03 OrthoFinder output from all 47 species
Cba_g15047 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01007064001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
GSVIVT01022645001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 OrthoFinder output from all 47 species
Gb_20217 No alias G2-like GARP transcription factor 0.04 OrthoFinder output from all 47 species
Gb_26823 No alias Myb family transcription factor PHL7 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
LOC_Os03g03760.1 LOC_Os03g03760 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
LOC_Os05g41240.1 LOC_Os05g41240 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
Len_g03202 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Lfl_g05331 No alias transcription factor *(CLAUSA) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g12418 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Pir_g03399 PHL1 GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005961 KAN3 not classified & original description: CDS=52-843 0.03 OrthoFinder output from all 47 species
Sam_g08412 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Solyc05g051060.3.1 KAN, KAN1, Solyc05g051060 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Solyc09g005370.1.1 Solyc09g005370 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Solyc11g022470.2.1 Solyc11g022470 G2-like GARP transcription factor 0.05 OrthoFinder output from all 47 species
Zm00001e001526_P001 Zm00001e001526 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e030364_P002 Zm00001e030364 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e033757_P002 Zm00001e033757 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0019915 lipid storage IEP HCCA
BP GO:0051235 maintenance of location IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 265 316
IPR025756 Myb_CC_LHEQLE 348 395
No external refs found!